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Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinicall...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Science Publishing
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718111/ https://www.ncbi.nlm.nih.gov/pubmed/33250143 http://dx.doi.org/10.1016/j.artmed.2020.101955 |
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author | Zhang, Qiang Hann, Evan Werys, Konrad Wu, Cody Popescu, Iulia Lukaschuk, Elena Barutcu, Ahmet Ferreira, Vanessa M. Piechnik, Stefan K. |
author_facet | Zhang, Qiang Hann, Evan Werys, Konrad Wu, Cody Popescu, Iulia Lukaschuk, Elena Barutcu, Ahmet Ferreira, Vanessa M. Piechnik, Stefan K. |
author_sort | Zhang, Qiang |
collection | PubMed |
description | Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinically-robust T1 measurements. Manual quality control of T1-maps may provide reassurance, but is laborious and prone to error. We present a deep learning approach with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping. Firstly, we customised a multi-stream Convolutional Neural Network (CNN) image classifier to streamline the process of automatic motion artefact detection. Secondly, we imposed attention supervision to guide the CNN to focus on targeted myocardial segments. Thirdly, when there was disagreement between the human operator and machine, a second human validator reviewed and rescored the cases for adjudication and to identify the source of disagreement. The multi-stream neural networks demonstrated 89.8% agreement, 87.4% ROC-AUC on motion artefact detection with the human operator in the 2568 T1 maps. Trained with additional supervision on attention, agreements and AUC significantly improved to 91.5% and 89.1%, respectively (p < 0.001). Rescoring of disagreed cases by the second human validator revealed that human operator error was the primary cause of disagreement. Deep learning with attention supervision provides a quick and high-quality assurance of clinical images, and outperforms human operators. |
format | Online Article Text |
id | pubmed-7718111 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier Science Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-77181112020-12-09 Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping Zhang, Qiang Hann, Evan Werys, Konrad Wu, Cody Popescu, Iulia Lukaschuk, Elena Barutcu, Ahmet Ferreira, Vanessa M. Piechnik, Stefan K. Artif Intell Med Article Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinically-robust T1 measurements. Manual quality control of T1-maps may provide reassurance, but is laborious and prone to error. We present a deep learning approach with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping. Firstly, we customised a multi-stream Convolutional Neural Network (CNN) image classifier to streamline the process of automatic motion artefact detection. Secondly, we imposed attention supervision to guide the CNN to focus on targeted myocardial segments. Thirdly, when there was disagreement between the human operator and machine, a second human validator reviewed and rescored the cases for adjudication and to identify the source of disagreement. The multi-stream neural networks demonstrated 89.8% agreement, 87.4% ROC-AUC on motion artefact detection with the human operator in the 2568 T1 maps. Trained with additional supervision on attention, agreements and AUC significantly improved to 91.5% and 89.1%, respectively (p < 0.001). Rescoring of disagreed cases by the second human validator revealed that human operator error was the primary cause of disagreement. Deep learning with attention supervision provides a quick and high-quality assurance of clinical images, and outperforms human operators. Elsevier Science Publishing 2020-11 /pmc/articles/PMC7718111/ /pubmed/33250143 http://dx.doi.org/10.1016/j.artmed.2020.101955 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Qiang Hann, Evan Werys, Konrad Wu, Cody Popescu, Iulia Lukaschuk, Elena Barutcu, Ahmet Ferreira, Vanessa M. Piechnik, Stefan K. Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title | Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title_full | Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title_fullStr | Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title_full_unstemmed | Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title_short | Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping |
title_sort | deep learning with attention supervision for automated motion artefact detection in quality control of cardiac t1-mapping |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718111/ https://www.ncbi.nlm.nih.gov/pubmed/33250143 http://dx.doi.org/10.1016/j.artmed.2020.101955 |
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