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Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping

Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinicall...

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Autores principales: Zhang, Qiang, Hann, Evan, Werys, Konrad, Wu, Cody, Popescu, Iulia, Lukaschuk, Elena, Barutcu, Ahmet, Ferreira, Vanessa M., Piechnik, Stefan K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Science Publishing 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718111/
https://www.ncbi.nlm.nih.gov/pubmed/33250143
http://dx.doi.org/10.1016/j.artmed.2020.101955
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author Zhang, Qiang
Hann, Evan
Werys, Konrad
Wu, Cody
Popescu, Iulia
Lukaschuk, Elena
Barutcu, Ahmet
Ferreira, Vanessa M.
Piechnik, Stefan K.
author_facet Zhang, Qiang
Hann, Evan
Werys, Konrad
Wu, Cody
Popescu, Iulia
Lukaschuk, Elena
Barutcu, Ahmet
Ferreira, Vanessa M.
Piechnik, Stefan K.
author_sort Zhang, Qiang
collection PubMed
description Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinically-robust T1 measurements. Manual quality control of T1-maps may provide reassurance, but is laborious and prone to error. We present a deep learning approach with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping. Firstly, we customised a multi-stream Convolutional Neural Network (CNN) image classifier to streamline the process of automatic motion artefact detection. Secondly, we imposed attention supervision to guide the CNN to focus on targeted myocardial segments. Thirdly, when there was disagreement between the human operator and machine, a second human validator reviewed and rescored the cases for adjudication and to identify the source of disagreement. The multi-stream neural networks demonstrated 89.8% agreement, 87.4% ROC-AUC on motion artefact detection with the human operator in the 2568 T1 maps. Trained with additional supervision on attention, agreements and AUC significantly improved to 91.5% and 89.1%, respectively (p < 0.001). Rescoring of disagreed cases by the second human validator revealed that human operator error was the primary cause of disagreement. Deep learning with attention supervision provides a quick and high-quality assurance of clinical images, and outperforms human operators.
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spelling pubmed-77181112020-12-09 Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping Zhang, Qiang Hann, Evan Werys, Konrad Wu, Cody Popescu, Iulia Lukaschuk, Elena Barutcu, Ahmet Ferreira, Vanessa M. Piechnik, Stefan K. Artif Intell Med Article Cardiac magnetic resonance quantitative T1-mapping is increasingly used for advanced myocardial tissue characterisation. However, cardiac or respiratory motion can significantly affect the diagnostic utility of T1-maps, and thus motion artefact detection is critical for quality control and clinically-robust T1 measurements. Manual quality control of T1-maps may provide reassurance, but is laborious and prone to error. We present a deep learning approach with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping. Firstly, we customised a multi-stream Convolutional Neural Network (CNN) image classifier to streamline the process of automatic motion artefact detection. Secondly, we imposed attention supervision to guide the CNN to focus on targeted myocardial segments. Thirdly, when there was disagreement between the human operator and machine, a second human validator reviewed and rescored the cases for adjudication and to identify the source of disagreement. The multi-stream neural networks demonstrated 89.8% agreement, 87.4% ROC-AUC on motion artefact detection with the human operator in the 2568 T1 maps. Trained with additional supervision on attention, agreements and AUC significantly improved to 91.5% and 89.1%, respectively (p < 0.001). Rescoring of disagreed cases by the second human validator revealed that human operator error was the primary cause of disagreement. Deep learning with attention supervision provides a quick and high-quality assurance of clinical images, and outperforms human operators. Elsevier Science Publishing 2020-11 /pmc/articles/PMC7718111/ /pubmed/33250143 http://dx.doi.org/10.1016/j.artmed.2020.101955 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Qiang
Hann, Evan
Werys, Konrad
Wu, Cody
Popescu, Iulia
Lukaschuk, Elena
Barutcu, Ahmet
Ferreira, Vanessa M.
Piechnik, Stefan K.
Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title_full Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title_fullStr Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title_full_unstemmed Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title_short Deep learning with attention supervision for automated motion artefact detection in quality control of cardiac T1-mapping
title_sort deep learning with attention supervision for automated motion artefact detection in quality control of cardiac t1-mapping
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718111/
https://www.ncbi.nlm.nih.gov/pubmed/33250143
http://dx.doi.org/10.1016/j.artmed.2020.101955
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