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DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)

Identification of pyraloid species is often hampered by highly similar external morphology requiring microscopic dissection of genitalia. This becomes especially obvious when mass samples from ecological studies or insect monitoring have to be analysed. DNA barcode sequences could accelerate identif...

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Autores principales: Wöger, Renate, Wöger, Roland, Nuss, Matthias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718215/
https://www.ncbi.nlm.nih.gov/pubmed/33293886
http://dx.doi.org/10.3897/BDJ.8.e58841
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author Wöger, Renate
Wöger, Roland
Nuss, Matthias
author_facet Wöger, Renate
Wöger, Roland
Nuss, Matthias
author_sort Wöger, Renate
collection PubMed
description Identification of pyraloid species is often hampered by highly similar external morphology requiring microscopic dissection of genitalia. This becomes especially obvious when mass samples from ecological studies or insect monitoring have to be analysed. DNA barcode sequences could accelerate identification, but are not available for most pyraloid species from New Zealand. Hence, we are presenting a first DNA-barcode library for this group, providing 440 COI barcodes (cytochrome C oxidase I sequences) for 73 morphologically-identified species, which is 29% of Pyraloidea known from New Zealand. Results are analysed using the Barcode Index Number system (BIN) of BOLD and the Automatic Barcode Gap Discovery method (ABGD). Using BIN, the 440 barcodes reveal 82 clusters. A perfect match between BIN assignment and morphological identification was found for 63 species (86.3%). Four species (5.5%) share BINs, each with two species in one BIN, of which Glaucocharis epiphaea and Glaucocharis harmonica even share the same barcode. In contrast, six species (8.2%) split into two or more BINs, with the highest number of five BINs for Orocrambus ramosellus. The interspecific variation of all collected specimens of New Zealand Pyraloidea averages 12.54%. There are deep intraspecific divergences (> 2%) in seven species, for instance Orocrambus vulgaris with up to 6.6% and Scoparia ustimacula with 5.5%. Using ABGD, the 440 barcodes reveal 71 or 88 operational taxonomic units (OTUs), depending on the preferred partition. A perfect match between OTU and morphological identification was found for 56 species (76.7%) or 62 species (84.9%). ABGD delivers four or seven species sharing OTUs and four or ten species split into more than one OTU. Morphological re-examination, as well as the analysis of a concatenated dataset of COI and the nuclear markers EF1α and GADPH for species split into more than one BIN or OTU, do not support a higher number of species. Likewise, there is no evidence for Wolbachia infection as a trigger for these sequence variations.
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spelling pubmed-77182152020-12-07 DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera) Wöger, Renate Wöger, Roland Nuss, Matthias Biodivers Data J Research Article Identification of pyraloid species is often hampered by highly similar external morphology requiring microscopic dissection of genitalia. This becomes especially obvious when mass samples from ecological studies or insect monitoring have to be analysed. DNA barcode sequences could accelerate identification, but are not available for most pyraloid species from New Zealand. Hence, we are presenting a first DNA-barcode library for this group, providing 440 COI barcodes (cytochrome C oxidase I sequences) for 73 morphologically-identified species, which is 29% of Pyraloidea known from New Zealand. Results are analysed using the Barcode Index Number system (BIN) of BOLD and the Automatic Barcode Gap Discovery method (ABGD). Using BIN, the 440 barcodes reveal 82 clusters. A perfect match between BIN assignment and morphological identification was found for 63 species (86.3%). Four species (5.5%) share BINs, each with two species in one BIN, of which Glaucocharis epiphaea and Glaucocharis harmonica even share the same barcode. In contrast, six species (8.2%) split into two or more BINs, with the highest number of five BINs for Orocrambus ramosellus. The interspecific variation of all collected specimens of New Zealand Pyraloidea averages 12.54%. There are deep intraspecific divergences (> 2%) in seven species, for instance Orocrambus vulgaris with up to 6.6% and Scoparia ustimacula with 5.5%. Using ABGD, the 440 barcodes reveal 71 or 88 operational taxonomic units (OTUs), depending on the preferred partition. A perfect match between OTU and morphological identification was found for 56 species (76.7%) or 62 species (84.9%). ABGD delivers four or seven species sharing OTUs and four or ten species split into more than one OTU. Morphological re-examination, as well as the analysis of a concatenated dataset of COI and the nuclear markers EF1α and GADPH for species split into more than one BIN or OTU, do not support a higher number of species. Likewise, there is no evidence for Wolbachia infection as a trigger for these sequence variations. Pensoft Publishers 2020-11-27 /pmc/articles/PMC7718215/ /pubmed/33293886 http://dx.doi.org/10.3897/BDJ.8.e58841 Text en Renate Wöger, Roland Wöger, Matthias Nuss http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wöger, Renate
Wöger, Roland
Nuss, Matthias
DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title_full DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title_fullStr DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title_full_unstemmed DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title_short DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera)
title_sort dna barcodes for aotearoa new zealand pyraloidea (lepidoptera)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718215/
https://www.ncbi.nlm.nih.gov/pubmed/33293886
http://dx.doi.org/10.3897/BDJ.8.e58841
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