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Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis

Prostate cancer (PCa) is a leading adult malignant tumor. Recent research has shown that speckle-type BTB/POZ protein (SPOP) mutant is the top frequently mutated gene in PCa, which makes it an important biomarker. In this paper, we aimed at identifying critical genes and pathways related to SPOP mut...

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Autores principales: Ding, Guanxiong, Sun, Jianliang, Jiang, Lianhua, Gao, Peng, Zhou, Qidong, Wang, Jianqing, Tong, Shijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718645/
https://www.ncbi.nlm.nih.gov/pubmed/33336059
http://dx.doi.org/10.1515/med-2020-0237
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author Ding, Guanxiong
Sun, Jianliang
Jiang, Lianhua
Gao, Peng
Zhou, Qidong
Wang, Jianqing
Tong, Shijun
author_facet Ding, Guanxiong
Sun, Jianliang
Jiang, Lianhua
Gao, Peng
Zhou, Qidong
Wang, Jianqing
Tong, Shijun
author_sort Ding, Guanxiong
collection PubMed
description Prostate cancer (PCa) is a leading adult malignant tumor. Recent research has shown that speckle-type BTB/POZ protein (SPOP) mutant is the top frequently mutated gene in PCa, which makes it an important biomarker. In this paper, we aimed at identifying critical genes and pathways related to SPOP mutation in PCa. Recent The Cancer Genome Atlas data showed that 12% of patients with PCa were SPOP mutant. There were 1,570 differentially expressed genes, and online enrichment analysis showed that these genes were mainly enriched in metabolism, pathways in cancer and reactive oxygen species. INS, GNG13, IL6, HTR5A, SAA1, PPY, CXCR5, CXCL13, CD19 and CCL20 were identified as hub genes. The lower SPOP expression level was associated with poor prognosis. In all, our findings showed that various pathways and genes could play critical roles in SPOP mutation in PCa, providing potential options for individualized treatment.
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spelling pubmed-77186452020-12-16 Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis Ding, Guanxiong Sun, Jianliang Jiang, Lianhua Gao, Peng Zhou, Qidong Wang, Jianqing Tong, Shijun Open Med (Wars) Research Article Prostate cancer (PCa) is a leading adult malignant tumor. Recent research has shown that speckle-type BTB/POZ protein (SPOP) mutant is the top frequently mutated gene in PCa, which makes it an important biomarker. In this paper, we aimed at identifying critical genes and pathways related to SPOP mutation in PCa. Recent The Cancer Genome Atlas data showed that 12% of patients with PCa were SPOP mutant. There were 1,570 differentially expressed genes, and online enrichment analysis showed that these genes were mainly enriched in metabolism, pathways in cancer and reactive oxygen species. INS, GNG13, IL6, HTR5A, SAA1, PPY, CXCR5, CXCL13, CD19 and CCL20 were identified as hub genes. The lower SPOP expression level was associated with poor prognosis. In all, our findings showed that various pathways and genes could play critical roles in SPOP mutation in PCa, providing potential options for individualized treatment. De Gruyter 2020-10-09 /pmc/articles/PMC7718645/ /pubmed/33336059 http://dx.doi.org/10.1515/med-2020-0237 Text en © 2020 Guanxiong Ding et al., published by De Gruyter http://creativecommons.org/licenses/by/4.0 This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Ding, Guanxiong
Sun, Jianliang
Jiang, Lianhua
Gao, Peng
Zhou, Qidong
Wang, Jianqing
Tong, Shijun
Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title_full Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title_fullStr Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title_full_unstemmed Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title_short Key pathways in prostate cancer with SPOP mutation identified by bioinformatic analysis
title_sort key pathways in prostate cancer with spop mutation identified by bioinformatic analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718645/
https://www.ncbi.nlm.nih.gov/pubmed/33336059
http://dx.doi.org/10.1515/med-2020-0237
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