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Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy

BACKGROUND: Epilepsy is a group of neurological disorders characterized by recurrent epileptic seizures. Epilepsy is affected by many factors, approximately 20–30% of cases are caused by acquired conditions, but in the remaining cases, genetic factors play an important role. Early establishment of a...

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Autores principales: Zhang, Linlin, Gao, Jinshuang, Liu, Hailiang, Tian, Yuan, Zhang, Xiaoli, Lei, Wei, Li, Ying, Guo, Yaqing, Yu, Haiyang, Yuan, Erfeng, Liang, Lisi, Cui, Shihong, Zhang, Xiaoan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720389/
https://www.ncbi.nlm.nih.gov/pubmed/33287870
http://dx.doi.org/10.1186/s40246-020-00294-0
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author Zhang, Linlin
Gao, Jinshuang
Liu, Hailiang
Tian, Yuan
Zhang, Xiaoli
Lei, Wei
Li, Ying
Guo, Yaqing
Yu, Haiyang
Yuan, Erfeng
Liang, Lisi
Cui, Shihong
Zhang, Xiaoan
author_facet Zhang, Linlin
Gao, Jinshuang
Liu, Hailiang
Tian, Yuan
Zhang, Xiaoli
Lei, Wei
Li, Ying
Guo, Yaqing
Yu, Haiyang
Yuan, Erfeng
Liang, Lisi
Cui, Shihong
Zhang, Xiaoan
author_sort Zhang, Linlin
collection PubMed
description BACKGROUND: Epilepsy is a group of neurological disorders characterized by recurrent epileptic seizures. Epilepsy is affected by many factors, approximately 20–30% of cases are caused by acquired conditions, but in the remaining cases, genetic factors play an important role. Early establishment of a specific diagnosis is important to treat and manage this disease. METHODS: In this study, we have recruited 43 epileptic encephalopathy patients and the molecular genetic analysis of those children was performed by whole-exome sequencing (WES). RESULTS: Fourteen patients (32.6%, 14/43) had positive genetic diagnoses, including fifteen mutations in fourteen genes. The overall diagnostic yield was 32.6%. A total of 9 patients were diagnosed as pathogenic mutations, including 4 variants had been reported as pathogenic previously and 6 novel variants that had not been reported previously. Therefore, WES heralds promise as a tool for clinical diagnosis of patients with genetic disease. CONCLUSION: Early establishment of a specific diagnosis, on the one hand, is necessary for providing an accurate prognosis and recurrence risk as well as optimizing management and treatment options. On the other hand, to unveil the genetic architecture of epilepsy, it is of vital importance to investigate the phenotypic and genetic complexity of epilepsy.
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spelling pubmed-77203892020-12-07 Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy Zhang, Linlin Gao, Jinshuang Liu, Hailiang Tian, Yuan Zhang, Xiaoli Lei, Wei Li, Ying Guo, Yaqing Yu, Haiyang Yuan, Erfeng Liang, Lisi Cui, Shihong Zhang, Xiaoan Hum Genomics Primary Research BACKGROUND: Epilepsy is a group of neurological disorders characterized by recurrent epileptic seizures. Epilepsy is affected by many factors, approximately 20–30% of cases are caused by acquired conditions, but in the remaining cases, genetic factors play an important role. Early establishment of a specific diagnosis is important to treat and manage this disease. METHODS: In this study, we have recruited 43 epileptic encephalopathy patients and the molecular genetic analysis of those children was performed by whole-exome sequencing (WES). RESULTS: Fourteen patients (32.6%, 14/43) had positive genetic diagnoses, including fifteen mutations in fourteen genes. The overall diagnostic yield was 32.6%. A total of 9 patients were diagnosed as pathogenic mutations, including 4 variants had been reported as pathogenic previously and 6 novel variants that had not been reported previously. Therefore, WES heralds promise as a tool for clinical diagnosis of patients with genetic disease. CONCLUSION: Early establishment of a specific diagnosis, on the one hand, is necessary for providing an accurate prognosis and recurrence risk as well as optimizing management and treatment options. On the other hand, to unveil the genetic architecture of epilepsy, it is of vital importance to investigate the phenotypic and genetic complexity of epilepsy. BioMed Central 2020-12-07 /pmc/articles/PMC7720389/ /pubmed/33287870 http://dx.doi.org/10.1186/s40246-020-00294-0 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Primary Research
Zhang, Linlin
Gao, Jinshuang
Liu, Hailiang
Tian, Yuan
Zhang, Xiaoli
Lei, Wei
Li, Ying
Guo, Yaqing
Yu, Haiyang
Yuan, Erfeng
Liang, Lisi
Cui, Shihong
Zhang, Xiaoan
Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title_full Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title_fullStr Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title_full_unstemmed Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title_short Pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
title_sort pathogenic variants identified by whole-exome sequencing in 43 patients with epilepsy
topic Primary Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720389/
https://www.ncbi.nlm.nih.gov/pubmed/33287870
http://dx.doi.org/10.1186/s40246-020-00294-0
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