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Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma
BACKGROUND: Hepatocellular carcinoma (HCC) is a malignancy with high incidence and mortality rates worldwide. Alcohol dehydrogenases (ADHs) are huge family of dehydrogenase enzymes and associated with the prognosis of various cancers. However, comprehensive analysis of prognostic implications relate...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720489/ https://www.ncbi.nlm.nih.gov/pubmed/33287761 http://dx.doi.org/10.1186/s12885-020-07689-1 |
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author | Liu, Xiangye Li, Tingting Kong, Delong You, Hongjuan Kong, Fanyun Tang, Renxian |
author_facet | Liu, Xiangye Li, Tingting Kong, Delong You, Hongjuan Kong, Fanyun Tang, Renxian |
author_sort | Liu, Xiangye |
collection | PubMed |
description | BACKGROUND: Hepatocellular carcinoma (HCC) is a malignancy with high incidence and mortality rates worldwide. Alcohol dehydrogenases (ADHs) are huge family of dehydrogenase enzymes and associated with the prognosis of various cancers. However, comprehensive analysis of prognostic implications related to ADHs in HCC is still lacking and largely unknown. METHODS: The expression profiles and corresponding clinical information of HCC were obtained from The Cancer Genome Atlas (TCGA). Wilcoxon signed-rank test was employed to evaluate the expression of ADHs. Cox regression and Kaplan-Meier analyses were used to investigate the association between clinicopathological characteristics and survival. GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analyses were performed and visualized using R/BiocManager package. RESULTS: We found that the expression of ADH1A, ADH1B, ADH1C, ADH4, and ADH6 was significantly downregulated in HCC samples compared to normal liver samples. Our univariate and multivariate Cox regression analyses results showed that high expression of ADH1A, ADH1B, ADH1C, ADH4, and ADH6 was considered as an independent factor with an improved prognosis for the survival of HCC patients. Moreover, our Kaplan-Meier analysis results also revealed that high expression of AHD1A, ADH1B, ADH1C, ADH4, and ADH6 was significantly associated with good survival rate in HCC patients. In addition, GO, KEGG, and GSEA analyses unveiled several oncogenic signaling pathways were negatively associated high expression of ADHs in HCC. CONCLUSION: In the present study, our results provide the potential prognostic biomarkers or molecular targets for the patients with HCC. |
format | Online Article Text |
id | pubmed-7720489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-77204892020-12-07 Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma Liu, Xiangye Li, Tingting Kong, Delong You, Hongjuan Kong, Fanyun Tang, Renxian BMC Cancer Research Article BACKGROUND: Hepatocellular carcinoma (HCC) is a malignancy with high incidence and mortality rates worldwide. Alcohol dehydrogenases (ADHs) are huge family of dehydrogenase enzymes and associated with the prognosis of various cancers. However, comprehensive analysis of prognostic implications related to ADHs in HCC is still lacking and largely unknown. METHODS: The expression profiles and corresponding clinical information of HCC were obtained from The Cancer Genome Atlas (TCGA). Wilcoxon signed-rank test was employed to evaluate the expression of ADHs. Cox regression and Kaplan-Meier analyses were used to investigate the association between clinicopathological characteristics and survival. GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analyses were performed and visualized using R/BiocManager package. RESULTS: We found that the expression of ADH1A, ADH1B, ADH1C, ADH4, and ADH6 was significantly downregulated in HCC samples compared to normal liver samples. Our univariate and multivariate Cox regression analyses results showed that high expression of ADH1A, ADH1B, ADH1C, ADH4, and ADH6 was considered as an independent factor with an improved prognosis for the survival of HCC patients. Moreover, our Kaplan-Meier analysis results also revealed that high expression of AHD1A, ADH1B, ADH1C, ADH4, and ADH6 was significantly associated with good survival rate in HCC patients. In addition, GO, KEGG, and GSEA analyses unveiled several oncogenic signaling pathways were negatively associated high expression of ADHs in HCC. CONCLUSION: In the present study, our results provide the potential prognostic biomarkers or molecular targets for the patients with HCC. BioMed Central 2020-12-07 /pmc/articles/PMC7720489/ /pubmed/33287761 http://dx.doi.org/10.1186/s12885-020-07689-1 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Liu, Xiangye Li, Tingting Kong, Delong You, Hongjuan Kong, Fanyun Tang, Renxian Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title | Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title_full | Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title_fullStr | Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title_full_unstemmed | Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title_short | Prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
title_sort | prognostic implications of alcohol dehydrogenases in hepatocellular carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720489/ https://www.ncbi.nlm.nih.gov/pubmed/33287761 http://dx.doi.org/10.1186/s12885-020-07689-1 |
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