The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations

We presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37...

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Autores principales: Choi, Yun Gyeong, Yun, Narae, Park, Jongsun, Xi, Hong, Min, Juhyeon, Kim, Yongsung, Oh, Sang-Hun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720945/
https://www.ncbi.nlm.nih.gov/pubmed/33366517
http://dx.doi.org/10.1080/23802359.2019.1698360
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author Choi, Yun Gyeong
Yun, Narae
Park, Jongsun
Xi, Hong
Min, Juhyeon
Kim, Yongsung
Oh, Sang-Hun
author_facet Choi, Yun Gyeong
Yun, Narae
Park, Jongsun
Xi, Hong
Min, Juhyeon
Kim, Yongsung
Oh, Sang-Hun
author_sort Choi, Yun Gyeong
collection PubMed
description We presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). A low-level of molecular variation within Viburnum erosum was found with 16 SNPs and 49 indels. The phylogenetic tree shows that the two accessions of V. erosum are clustered with Viburnum japonicum with no resolution between the species, suggesting that chloroplast genome in these species evolve slowly.
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spelling pubmed-77209452020-12-22 The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations Choi, Yun Gyeong Yun, Narae Park, Jongsun Xi, Hong Min, Juhyeon Kim, Yongsung Oh, Sang-Hun Mitochondrial DNA B Resour Mitogenome Announcement We presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). A low-level of molecular variation within Viburnum erosum was found with 16 SNPs and 49 indels. The phylogenetic tree shows that the two accessions of V. erosum are clustered with Viburnum japonicum with no resolution between the species, suggesting that chloroplast genome in these species evolve slowly. Taylor & Francis 2019-12-13 /pmc/articles/PMC7720945/ /pubmed/33366517 http://dx.doi.org/10.1080/23802359.2019.1698360 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Choi, Yun Gyeong
Yun, Narae
Park, Jongsun
Xi, Hong
Min, Juhyeon
Kim, Yongsung
Oh, Sang-Hun
The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title_full The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title_fullStr The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title_full_unstemmed The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title_short The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
title_sort second complete chloroplast genome sequence of the viburnum erosum (adoxaceae) showed a low level of intra-species variations
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720945/
https://www.ncbi.nlm.nih.gov/pubmed/33366517
http://dx.doi.org/10.1080/23802359.2019.1698360
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