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Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet....
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720949/ https://www.ncbi.nlm.nih.gov/pubmed/33366468 http://dx.doi.org/10.1080/23802359.2019.1698364 |
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author | Zamora-Tavares, María del Pilar Sandoval-Padilla, Isaac Chávez Zendejas, Abigail Pérez-Alquicira, Jessica Vargas-Ponce, Ofelia |
author_facet | Zamora-Tavares, María del Pilar Sandoval-Padilla, Isaac Chávez Zendejas, Abigail Pérez-Alquicira, Jessica Vargas-Ponce, Ofelia |
author_sort | Zamora-Tavares, María del Pilar |
collection | PubMed |
description | Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed. |
format | Online Article Text |
id | pubmed-7720949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77209492020-12-22 Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) Zamora-Tavares, María del Pilar Sandoval-Padilla, Isaac Chávez Zendejas, Abigail Pérez-Alquicira, Jessica Vargas-Ponce, Ofelia Mitochondrial DNA B Resour Mitogenome Announcement Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed. Taylor & Francis 2019-12-11 /pmc/articles/PMC7720949/ /pubmed/33366468 http://dx.doi.org/10.1080/23802359.2019.1698364 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zamora-Tavares, María del Pilar Sandoval-Padilla, Isaac Chávez Zendejas, Abigail Pérez-Alquicira, Jessica Vargas-Ponce, Ofelia Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title_full | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title_fullStr | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title_full_unstemmed | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title_short | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
title_sort | complete chloroplast genome of physalis chenopodifolia lam. (solanaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720949/ https://www.ncbi.nlm.nih.gov/pubmed/33366468 http://dx.doi.org/10.1080/23802359.2019.1698364 |
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