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Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)

Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet....

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Autores principales: Zamora-Tavares, María del Pilar, Sandoval-Padilla, Isaac, Chávez Zendejas, Abigail, Pérez-Alquicira, Jessica, Vargas-Ponce, Ofelia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720949/
https://www.ncbi.nlm.nih.gov/pubmed/33366468
http://dx.doi.org/10.1080/23802359.2019.1698364
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author Zamora-Tavares, María del Pilar
Sandoval-Padilla, Isaac
Chávez Zendejas, Abigail
Pérez-Alquicira, Jessica
Vargas-Ponce, Ofelia
author_facet Zamora-Tavares, María del Pilar
Sandoval-Padilla, Isaac
Chávez Zendejas, Abigail
Pérez-Alquicira, Jessica
Vargas-Ponce, Ofelia
author_sort Zamora-Tavares, María del Pilar
collection PubMed
description Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed.
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spelling pubmed-77209492020-12-22 Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) Zamora-Tavares, María del Pilar Sandoval-Padilla, Isaac Chávez Zendejas, Abigail Pérez-Alquicira, Jessica Vargas-Ponce, Ofelia Mitochondrial DNA B Resour Mitogenome Announcement Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed. Taylor & Francis 2019-12-11 /pmc/articles/PMC7720949/ /pubmed/33366468 http://dx.doi.org/10.1080/23802359.2019.1698364 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zamora-Tavares, María del Pilar
Sandoval-Padilla, Isaac
Chávez Zendejas, Abigail
Pérez-Alquicira, Jessica
Vargas-Ponce, Ofelia
Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title_full Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title_fullStr Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title_full_unstemmed Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title_short Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
title_sort complete chloroplast genome of physalis chenopodifolia lam. (solanaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720949/
https://www.ncbi.nlm.nih.gov/pubmed/33366468
http://dx.doi.org/10.1080/23802359.2019.1698364
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