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Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)

The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna...

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Autores principales: Tabassum, Nazia, Alam, Md. Jobaidul, Kim, Jeong-Hoon, Lee, Soo Rin, Lee, Ji-Hyun, Park, Hyun, Kim, Hyun-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720972/
https://www.ncbi.nlm.nih.gov/pubmed/33366465
http://dx.doi.org/10.1080/23802359.2019.1698361
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author Tabassum, Nazia
Alam, Md. Jobaidul
Kim, Jeong-Hoon
Lee, Soo Rin
Lee, Ji-Hyun
Park, Hyun
Kim, Hyun-Woo
author_facet Tabassum, Nazia
Alam, Md. Jobaidul
Kim, Jeong-Hoon
Lee, Soo Rin
Lee, Ji-Hyun
Park, Hyun
Kim, Hyun-Woo
author_sort Tabassum, Nazia
collection PubMed
description The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna was identical to the other icefish species, in which there was additional non-coding region and translocation of ND6 gene. Except for ATP6 gene and COI (GTG), 11 genes begin with the typical start codon, while incomplete stop codons (T– –) were identified in COII, ND4, and CytB. Phylogenetic tree with the currently known mitogenomes in suborder Notothenioidei showed that P. albipinna was located distinctly from those in Bathydraconidae and Nototheniidae forming a unique cluster as Artedidraconidae. The first complete mitochondrial genome of P. albipinna would be the fundamental data to understand the evolutional relationship of icefish species in the Antarctic Oceans.
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spelling pubmed-77209722020-12-22 Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) Tabassum, Nazia Alam, Md. Jobaidul Kim, Jeong-Hoon Lee, Soo Rin Lee, Ji-Hyun Park, Hyun Kim, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna was identical to the other icefish species, in which there was additional non-coding region and translocation of ND6 gene. Except for ATP6 gene and COI (GTG), 11 genes begin with the typical start codon, while incomplete stop codons (T– –) were identified in COII, ND4, and CytB. Phylogenetic tree with the currently known mitogenomes in suborder Notothenioidei showed that P. albipinna was located distinctly from those in Bathydraconidae and Nototheniidae forming a unique cluster as Artedidraconidae. The first complete mitochondrial genome of P. albipinna would be the fundamental data to understand the evolutional relationship of icefish species in the Antarctic Oceans. Taylor & Francis 2019-12-12 /pmc/articles/PMC7720972/ /pubmed/33366465 http://dx.doi.org/10.1080/23802359.2019.1698361 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tabassum, Nazia
Alam, Md. Jobaidul
Kim, Jeong-Hoon
Lee, Soo Rin
Lee, Ji-Hyun
Park, Hyun
Kim, Hyun-Woo
Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title_full Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title_fullStr Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title_full_unstemmed Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title_short Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
title_sort characterization of complete mitochondrial genome of pogonophryne albipinna (perciformes: artedidraconidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720972/
https://www.ncbi.nlm.nih.gov/pubmed/33366465
http://dx.doi.org/10.1080/23802359.2019.1698361
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