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Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)
The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720972/ https://www.ncbi.nlm.nih.gov/pubmed/33366465 http://dx.doi.org/10.1080/23802359.2019.1698361 |
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author | Tabassum, Nazia Alam, Md. Jobaidul Kim, Jeong-Hoon Lee, Soo Rin Lee, Ji-Hyun Park, Hyun Kim, Hyun-Woo |
author_facet | Tabassum, Nazia Alam, Md. Jobaidul Kim, Jeong-Hoon Lee, Soo Rin Lee, Ji-Hyun Park, Hyun Kim, Hyun-Woo |
author_sort | Tabassum, Nazia |
collection | PubMed |
description | The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna was identical to the other icefish species, in which there was additional non-coding region and translocation of ND6 gene. Except for ATP6 gene and COI (GTG), 11 genes begin with the typical start codon, while incomplete stop codons (T– –) were identified in COII, ND4, and CytB. Phylogenetic tree with the currently known mitogenomes in suborder Notothenioidei showed that P. albipinna was located distinctly from those in Bathydraconidae and Nototheniidae forming a unique cluster as Artedidraconidae. The first complete mitochondrial genome of P. albipinna would be the fundamental data to understand the evolutional relationship of icefish species in the Antarctic Oceans. |
format | Online Article Text |
id | pubmed-7720972 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77209722020-12-22 Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) Tabassum, Nazia Alam, Md. Jobaidul Kim, Jeong-Hoon Lee, Soo Rin Lee, Ji-Hyun Park, Hyun Kim, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of P. albipinna was identical to the other icefish species, in which there was additional non-coding region and translocation of ND6 gene. Except for ATP6 gene and COI (GTG), 11 genes begin with the typical start codon, while incomplete stop codons (T– –) were identified in COII, ND4, and CytB. Phylogenetic tree with the currently known mitogenomes in suborder Notothenioidei showed that P. albipinna was located distinctly from those in Bathydraconidae and Nototheniidae forming a unique cluster as Artedidraconidae. The first complete mitochondrial genome of P. albipinna would be the fundamental data to understand the evolutional relationship of icefish species in the Antarctic Oceans. Taylor & Francis 2019-12-12 /pmc/articles/PMC7720972/ /pubmed/33366465 http://dx.doi.org/10.1080/23802359.2019.1698361 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Tabassum, Nazia Alam, Md. Jobaidul Kim, Jeong-Hoon Lee, Soo Rin Lee, Ji-Hyun Park, Hyun Kim, Hyun-Woo Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title | Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title_full | Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title_fullStr | Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title_full_unstemmed | Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title_short | Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae) |
title_sort | characterization of complete mitochondrial genome of pogonophryne albipinna (perciformes: artedidraconidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720972/ https://www.ncbi.nlm.nih.gov/pubmed/33366465 http://dx.doi.org/10.1080/23802359.2019.1698361 |
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