The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution

Tainia dunnii is a terrestrial orchid with high ornamental value. Herein, we assembled the complete chloroplast genome of Tainia dunnii by next-generation sequencing technologies. The complete chloroplast genome sequence of Tainia dunnii is 158,305 base pairs (bp) in length, including a pair of inve...

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Autores principales: Xie, Tai-Xiang, Yu, Xia, Zheng, Qing-Dong, Ma, Shan-Hu, Liu, Zhong-Jian, Ai, Ye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720984/
https://www.ncbi.nlm.nih.gov/pubmed/33366394
http://dx.doi.org/10.1080/23802359.2019.1693935
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author Xie, Tai-Xiang
Yu, Xia
Zheng, Qing-Dong
Ma, Shan-Hu
Liu, Zhong-Jian
Ai, Ye
author_facet Xie, Tai-Xiang
Yu, Xia
Zheng, Qing-Dong
Ma, Shan-Hu
Liu, Zhong-Jian
Ai, Ye
author_sort Xie, Tai-Xiang
collection PubMed
description Tainia dunnii is a terrestrial orchid with high ornamental value. Herein, we assembled the complete chloroplast genome of Tainia dunnii by next-generation sequencing technologies. The complete chloroplast genome sequence of Tainia dunnii is 158,305 base pairs (bp) in length, including a pair of inverted repeat regions (IRs, 25,244 bp), one large single-copy region (LSC, 86,819 bp), one small single-copy region (SSC, 20,998 bp). Besides, the complete chloroplast genome contains 136 genes in total, including 88 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that Tainia dunnii has the closest relationship with Calanthe davidii and Calanthe triplicata. Our study lay a foundation for further research of Tainia dunnii.
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spelling pubmed-77209842020-12-22 The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution Xie, Tai-Xiang Yu, Xia Zheng, Qing-Dong Ma, Shan-Hu Liu, Zhong-Jian Ai, Ye Mitochondrial DNA B Resour Mitogenome Announcement Tainia dunnii is a terrestrial orchid with high ornamental value. Herein, we assembled the complete chloroplast genome of Tainia dunnii by next-generation sequencing technologies. The complete chloroplast genome sequence of Tainia dunnii is 158,305 base pairs (bp) in length, including a pair of inverted repeat regions (IRs, 25,244 bp), one large single-copy region (LSC, 86,819 bp), one small single-copy region (SSC, 20,998 bp). Besides, the complete chloroplast genome contains 136 genes in total, including 88 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that Tainia dunnii has the closest relationship with Calanthe davidii and Calanthe triplicata. Our study lay a foundation for further research of Tainia dunnii. Taylor & Francis 2019-12-10 /pmc/articles/PMC7720984/ /pubmed/33366394 http://dx.doi.org/10.1080/23802359.2019.1693935 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Tai-Xiang
Yu, Xia
Zheng, Qing-Dong
Ma, Shan-Hu
Liu, Zhong-Jian
Ai, Ye
The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title_full The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title_fullStr The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title_full_unstemmed The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title_short The complete chloroplast genome of Tainia dunnii (Orchidaceae): genome structure and evolution
title_sort complete chloroplast genome of tainia dunnii (orchidaceae): genome structure and evolution
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720984/
https://www.ncbi.nlm.nih.gov/pubmed/33366394
http://dx.doi.org/10.1080/23802359.2019.1693935
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