Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)

The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and...

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Detalles Bibliográficos
Autores principales: Tu, Xiong-De, Zhang, Sai, Liu, Ding-Kun, Li, Ming-He
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720991/
https://www.ncbi.nlm.nih.gov/pubmed/33366452
http://dx.doi.org/10.1080/23802359.2019.1698347
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author Tu, Xiong-De
Zhang, Sai
Liu, Ding-Kun
Li, Ming-He
author_facet Tu, Xiong-De
Zhang, Sai
Liu, Ding-Kun
Li, Ming-He
author_sort Tu, Xiong-De
collection PubMed
description The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and IRB) of 25,684 bp. The genome contained 131 genes, including 38 transfer RNA (tRNA) genes, 8 ribosomal RNA (rRNA) genes and 85 protein-coding genes. Phylogenomic analysis indicated that Ch. chinensis nested within Goodyerinae.
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spelling pubmed-77209912020-12-22 Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) Tu, Xiong-De Zhang, Sai Liu, Ding-Kun Li, Ming-He Mitochondrial DNA B Resour Mitogenome Announcement The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and IRB) of 25,684 bp. The genome contained 131 genes, including 38 transfer RNA (tRNA) genes, 8 ribosomal RNA (rRNA) genes and 85 protein-coding genes. Phylogenomic analysis indicated that Ch. chinensis nested within Goodyerinae. Taylor & Francis 2019-12-11 /pmc/articles/PMC7720991/ /pubmed/33366452 http://dx.doi.org/10.1080/23802359.2019.1698347 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tu, Xiong-De
Zhang, Sai
Liu, Ding-Kun
Li, Ming-He
Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title_full Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title_fullStr Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title_full_unstemmed Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title_short Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
title_sort complete plastid genome of cheirostylis chinensis (orchidaceae, goodyerinae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7720991/
https://www.ncbi.nlm.nih.gov/pubmed/33366452
http://dx.doi.org/10.1080/23802359.2019.1698347
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