The complete chloroplast genome of Liparis nervosa (Orchidaceae)

Liparis nervosa, a terrestrial orchid was widely used as a traditional medicinal plant in China. In this study, we assembled the complete chloroplast genome of L. nervosa using Illumina sequencing data. The whole genome is 158,716 bp, contains a large single-copy region (LSC 86,010 bp), a small sing...

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Autores principales: Zhang, Qing-Hua, Wang, Xiao-Ting, Zheng, Shu-Zhao, Zhu, Wei-Yao, Song, Zhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721019/
https://www.ncbi.nlm.nih.gov/pubmed/33366450
http://dx.doi.org/10.1080/23802359.2019.1698343
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author Zhang, Qing-Hua
Wang, Xiao-Ting
Zheng, Shu-Zhao
Zhu, Wei-Yao
Song, Zhang
author_facet Zhang, Qing-Hua
Wang, Xiao-Ting
Zheng, Shu-Zhao
Zhu, Wei-Yao
Song, Zhang
author_sort Zhang, Qing-Hua
collection PubMed
description Liparis nervosa, a terrestrial orchid was widely used as a traditional medicinal plant in China. In this study, we assembled the complete chloroplast genome of L. nervosa using Illumina sequencing data. The whole genome is 158,716 bp, contains a large single-copy region (LSC 86,010 bp), a small single-copy region (SSC 18,276 bp), and a pair of inverted repeats (IR 27,215 bp). The complete genome has 132 genes, including 77 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. In addition, a maximum-likelihood phylogenetic analysis demonstrated that L. nervosa was most closely related to Oberonia japonica. This work provides a theoretical basis for the development of conservation strategies of L. nervosa.
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spelling pubmed-77210192020-12-22 The complete chloroplast genome of Liparis nervosa (Orchidaceae) Zhang, Qing-Hua Wang, Xiao-Ting Zheng, Shu-Zhao Zhu, Wei-Yao Song, Zhang Mitochondrial DNA B Resour Mitogenome Announcement Liparis nervosa, a terrestrial orchid was widely used as a traditional medicinal plant in China. In this study, we assembled the complete chloroplast genome of L. nervosa using Illumina sequencing data. The whole genome is 158,716 bp, contains a large single-copy region (LSC 86,010 bp), a small single-copy region (SSC 18,276 bp), and a pair of inverted repeats (IR 27,215 bp). The complete genome has 132 genes, including 77 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. In addition, a maximum-likelihood phylogenetic analysis demonstrated that L. nervosa was most closely related to Oberonia japonica. This work provides a theoretical basis for the development of conservation strategies of L. nervosa. Taylor & Francis 2019-12-11 /pmc/articles/PMC7721019/ /pubmed/33366450 http://dx.doi.org/10.1080/23802359.2019.1698343 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Qing-Hua
Wang, Xiao-Ting
Zheng, Shu-Zhao
Zhu, Wei-Yao
Song, Zhang
The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title_full The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title_fullStr The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title_full_unstemmed The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title_short The complete chloroplast genome of Liparis nervosa (Orchidaceae)
title_sort complete chloroplast genome of liparis nervosa (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721019/
https://www.ncbi.nlm.nih.gov/pubmed/33366450
http://dx.doi.org/10.1080/23802359.2019.1698343
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