The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)

The complete chloroplast DNA sequence of Hypolepis sparsisora was the first time to report with 150,839 bp in length. The structure of the chloroplast genome is composed in four regions, which consisted a large single-repeat region (LSC) of 84,285 bp, a small single-repeat region (SSC) of 21,390 bp,...

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Detalles Bibliográficos
Autores principales: Mu, Yunong, Yan, Yuehong, Liu, Baodong, Shang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721022/
https://www.ncbi.nlm.nih.gov/pubmed/33366528
http://dx.doi.org/10.1080/23802359.2019.1693915
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author Mu, Yunong
Yan, Yuehong
Liu, Baodong
Shang, Hui
author_facet Mu, Yunong
Yan, Yuehong
Liu, Baodong
Shang, Hui
author_sort Mu, Yunong
collection PubMed
description The complete chloroplast DNA sequence of Hypolepis sparsisora was the first time to report with 150,839 bp in length. The structure of the chloroplast genome is composed in four regions, which consisted a large single-repeat region (LSC) of 84,285 bp, a small single-repeat region (SSC) of 21,390 bp, and two inverted repeat regions (IRs) of 22,582 bp, respectively. A total of 131genes including 8 rRNA genes, 35 tRNA genes, and 83 protein-coding genes were predicted. We obtained phylogenetic tree by using the complete chloroplast DNA of 15 species ferns. The ML and BI phylogenetic analysis showed the location of H. sparsisora in Dennstaedtiaceae and other families.
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spelling pubmed-77210222020-12-22 The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae) Mu, Yunong Yan, Yuehong Liu, Baodong Shang, Hui Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast DNA sequence of Hypolepis sparsisora was the first time to report with 150,839 bp in length. The structure of the chloroplast genome is composed in four regions, which consisted a large single-repeat region (LSC) of 84,285 bp, a small single-repeat region (SSC) of 21,390 bp, and two inverted repeat regions (IRs) of 22,582 bp, respectively. A total of 131genes including 8 rRNA genes, 35 tRNA genes, and 83 protein-coding genes were predicted. We obtained phylogenetic tree by using the complete chloroplast DNA of 15 species ferns. The ML and BI phylogenetic analysis showed the location of H. sparsisora in Dennstaedtiaceae and other families. Taylor & Francis 2019-12-13 /pmc/articles/PMC7721022/ /pubmed/33366528 http://dx.doi.org/10.1080/23802359.2019.1693915 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Mu, Yunong
Yan, Yuehong
Liu, Baodong
Shang, Hui
The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title_full The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title_fullStr The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title_short The complete chloroplast genome sequence of Hypolepis sparsisora (Dennstaedtiaceae)
title_sort complete chloroplast genome sequence of hypolepis sparsisora (dennstaedtiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721022/
https://www.ncbi.nlm.nih.gov/pubmed/33366528
http://dx.doi.org/10.1080/23802359.2019.1693915
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