The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang

The complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20...

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Autores principales: Yang, Aihong, Liu, Shujuan, Liu, Tengyun, Hu, Miao, Zhong, Yongda, Liu, Lipan, Yu, Faxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721030/
https://www.ncbi.nlm.nih.gov/pubmed/33366436
http://dx.doi.org/10.1080/23802359.2019.1698337
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author Yang, Aihong
Liu, Shujuan
Liu, Tengyun
Hu, Miao
Zhong, Yongda
Liu, Lipan
Yu, Faxin
author_facet Yang, Aihong
Liu, Shujuan
Liu, Tengyun
Hu, Miao
Zhong, Yongda
Liu, Lipan
Yu, Faxin
author_sort Yang, Aihong
collection PubMed
description The complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20,535bp, which were separated by two inverted repeat (IR) regions of 23,843 bp. The plastome contains 113 different genes, consisting of 79 unique protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on chloroplast genomes revealed that A. styracifolia has a close genetic relationship with A. eriantha.
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spelling pubmed-77210302020-12-22 The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang Yang, Aihong Liu, Shujuan Liu, Tengyun Hu, Miao Zhong, Yongda Liu, Lipan Yu, Faxin Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20,535bp, which were separated by two inverted repeat (IR) regions of 23,843 bp. The plastome contains 113 different genes, consisting of 79 unique protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on chloroplast genomes revealed that A. styracifolia has a close genetic relationship with A. eriantha. Taylor & Francis 2019-12-11 /pmc/articles/PMC7721030/ /pubmed/33366436 http://dx.doi.org/10.1080/23802359.2019.1698337 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Aihong
Liu, Shujuan
Liu, Tengyun
Hu, Miao
Zhong, Yongda
Liu, Lipan
Yu, Faxin
The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title_full The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title_fullStr The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title_full_unstemmed The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title_short The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
title_sort complete chloroplast genome sequence of actinidia styracifolia c. f. liang
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721030/
https://www.ncbi.nlm.nih.gov/pubmed/33366436
http://dx.doi.org/10.1080/23802359.2019.1698337
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