The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)

Tainia cordifolia is a subtropical plant with significant ornamental value. Herein, we determined the complete chloroplast (cp) genome sequence of T. cordifolia using Illumina sequencing data. The whole cp genome is 158,089 bp in size, consisting of a pair of inverted repeats (IR 25,260 bp), a large...

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Autores principales: Zheng, Qing-Dong, Zhou, Jie, Ma, Shan-Hu, Chen, Ming-Kun, Xie, Tai-Xiang, Chen, Juan, Ai, Ye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721050/
https://www.ncbi.nlm.nih.gov/pubmed/33366393
http://dx.doi.org/10.1080/23802359.2019.1693304
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author Zheng, Qing-Dong
Zhou, Jie
Ma, Shan-Hu
Chen, Ming-Kun
Xie, Tai-Xiang
Chen, Juan
Ai, Ye
author_facet Zheng, Qing-Dong
Zhou, Jie
Ma, Shan-Hu
Chen, Ming-Kun
Xie, Tai-Xiang
Chen, Juan
Ai, Ye
author_sort Zheng, Qing-Dong
collection PubMed
description Tainia cordifolia is a subtropical plant with significant ornamental value. Herein, we determined the complete chloroplast (cp) genome sequence of T. cordifolia using Illumina sequencing data. The whole cp genome is 158,089 bp in size, consisting of a pair of inverted repeats (IR 25,260 bp), a large single-copy region (LSC 86,876 bp), and a small single-copy region (SSC 20,693 bp). Plastid genome contains 136 genes, 88 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. What is more, a maximum-likelihood phylogenetic analysis demonstrated that T. cordifolia was most closely related to Oberonia japonica and Dendrobium salaccense. The cp genome will provide reference for the further investigation and research of T. cordifolia.
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spelling pubmed-77210502020-12-22 The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae) Zheng, Qing-Dong Zhou, Jie Ma, Shan-Hu Chen, Ming-Kun Xie, Tai-Xiang Chen, Juan Ai, Ye Mitochondrial DNA B Resour Mitogenome Announcement Tainia cordifolia is a subtropical plant with significant ornamental value. Herein, we determined the complete chloroplast (cp) genome sequence of T. cordifolia using Illumina sequencing data. The whole cp genome is 158,089 bp in size, consisting of a pair of inverted repeats (IR 25,260 bp), a large single-copy region (LSC 86,876 bp), and a small single-copy region (SSC 20,693 bp). Plastid genome contains 136 genes, 88 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. What is more, a maximum-likelihood phylogenetic analysis demonstrated that T. cordifolia was most closely related to Oberonia japonica and Dendrobium salaccense. The cp genome will provide reference for the further investigation and research of T. cordifolia. Taylor & Francis 2019-12-09 /pmc/articles/PMC7721050/ /pubmed/33366393 http://dx.doi.org/10.1080/23802359.2019.1693304 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zheng, Qing-Dong
Zhou, Jie
Ma, Shan-Hu
Chen, Ming-Kun
Xie, Tai-Xiang
Chen, Juan
Ai, Ye
The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title_full The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title_fullStr The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title_full_unstemmed The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title_short The complete chloroplast genome sequence of Tainia cordifolia (Orchidaceae)
title_sort complete chloroplast genome sequence of tainia cordifolia (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721050/
https://www.ncbi.nlm.nih.gov/pubmed/33366393
http://dx.doi.org/10.1080/23802359.2019.1693304
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