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Using antibodies to control DNA-templated chemical reactions

DNA-templated synthesis takes advantage of the programmability of DNA-DNA interactions to accelerate chemical reactions under diluted conditions upon sequence-specific hybridization. While this strategy has proven advantageous for a variety of applications, including sensing and drug discovery, it h...

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Autores principales: Baranda Pellejero, Lorena, Mahdifar, Malihe, Ercolani, Gianfranco, Watson, Jonathan, Brown, Tom, Ricci, Francesco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721721/
https://www.ncbi.nlm.nih.gov/pubmed/33288745
http://dx.doi.org/10.1038/s41467-020-20024-3
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author Baranda Pellejero, Lorena
Mahdifar, Malihe
Ercolani, Gianfranco
Watson, Jonathan
Brown, Tom
Ricci, Francesco
author_facet Baranda Pellejero, Lorena
Mahdifar, Malihe
Ercolani, Gianfranco
Watson, Jonathan
Brown, Tom
Ricci, Francesco
author_sort Baranda Pellejero, Lorena
collection PubMed
description DNA-templated synthesis takes advantage of the programmability of DNA-DNA interactions to accelerate chemical reactions under diluted conditions upon sequence-specific hybridization. While this strategy has proven advantageous for a variety of applications, including sensing and drug discovery, it has been so far limited to the use of nucleic acids as templating elements. Here, we report the rational design of DNA templated synthesis controlled by specific IgG antibodies. Our approach is based on the co-localization of reactants induced by the bivalent binding of a specific IgG antibody to two antigen-conjugated DNA templating strands that triggers a chemical reaction that would be otherwise too slow under diluted conditions. This strategy is versatile, orthogonal and adaptable to different IgG antibodies and can be employed to achieve the targeted synthesis of clinically-relevant molecules in the presence of specific IgG biomarker antibodies.
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spelling pubmed-77217212020-12-11 Using antibodies to control DNA-templated chemical reactions Baranda Pellejero, Lorena Mahdifar, Malihe Ercolani, Gianfranco Watson, Jonathan Brown, Tom Ricci, Francesco Nat Commun Article DNA-templated synthesis takes advantage of the programmability of DNA-DNA interactions to accelerate chemical reactions under diluted conditions upon sequence-specific hybridization. While this strategy has proven advantageous for a variety of applications, including sensing and drug discovery, it has been so far limited to the use of nucleic acids as templating elements. Here, we report the rational design of DNA templated synthesis controlled by specific IgG antibodies. Our approach is based on the co-localization of reactants induced by the bivalent binding of a specific IgG antibody to two antigen-conjugated DNA templating strands that triggers a chemical reaction that would be otherwise too slow under diluted conditions. This strategy is versatile, orthogonal and adaptable to different IgG antibodies and can be employed to achieve the targeted synthesis of clinically-relevant molecules in the presence of specific IgG biomarker antibodies. Nature Publishing Group UK 2020-12-07 /pmc/articles/PMC7721721/ /pubmed/33288745 http://dx.doi.org/10.1038/s41467-020-20024-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Baranda Pellejero, Lorena
Mahdifar, Malihe
Ercolani, Gianfranco
Watson, Jonathan
Brown, Tom
Ricci, Francesco
Using antibodies to control DNA-templated chemical reactions
title Using antibodies to control DNA-templated chemical reactions
title_full Using antibodies to control DNA-templated chemical reactions
title_fullStr Using antibodies to control DNA-templated chemical reactions
title_full_unstemmed Using antibodies to control DNA-templated chemical reactions
title_short Using antibodies to control DNA-templated chemical reactions
title_sort using antibodies to control dna-templated chemical reactions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7721721/
https://www.ncbi.nlm.nih.gov/pubmed/33288745
http://dx.doi.org/10.1038/s41467-020-20024-3
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