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Identification of key genes and pathways for melanoma in the TRIM family

Certain members of the TRIM family have been shown to have abnormal expression and prognostic value in cancer. However, in the development and progression of melanoma, the role of different TRIM family members remains unknown. To address this issue, this study used the Oncomine, UCSC, Human Protein...

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Detalles Bibliográficos
Autores principales: Xia, YiJun, Zhao, Jun, Yang, Chunjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7724299/
https://www.ncbi.nlm.nih.gov/pubmed/33118318
http://dx.doi.org/10.1002/cam4.3545
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author Xia, YiJun
Zhao, Jun
Yang, Chunjun
author_facet Xia, YiJun
Zhao, Jun
Yang, Chunjun
author_sort Xia, YiJun
collection PubMed
description Certain members of the TRIM family have been shown to have abnormal expression and prognostic value in cancer. However, in the development and progression of melanoma, the role of different TRIM family members remains unknown. To address this issue, this study used the Oncomine, UCSC, Human Protein Atlas, DAVID, and GEPIA databases to study the role of TRIMs in the prognosis of melanoma. Differential expression of TRIM2, TRIM7, TRIM8, TRIM18 (MID1), TRIM19 (PML), TRIM27, and TRIM29 may play an important role in the development of melanoma. The expression TRIM7 and TRIM29 appeared to be helpful in the identification of primary tumors and metastases. Survival analysis suggested that the expression of TRIM27 significantly affected the overall survival and disease‐free survival of melanoma, and its expression was confirmed by qRT‐PCR. Our results indicated that the expression level of TRIM27 might be a prognostic marker of melanoma.
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spelling pubmed-77242992020-12-13 Identification of key genes and pathways for melanoma in the TRIM family Xia, YiJun Zhao, Jun Yang, Chunjun Cancer Med Clinical Cancer Research Certain members of the TRIM family have been shown to have abnormal expression and prognostic value in cancer. However, in the development and progression of melanoma, the role of different TRIM family members remains unknown. To address this issue, this study used the Oncomine, UCSC, Human Protein Atlas, DAVID, and GEPIA databases to study the role of TRIMs in the prognosis of melanoma. Differential expression of TRIM2, TRIM7, TRIM8, TRIM18 (MID1), TRIM19 (PML), TRIM27, and TRIM29 may play an important role in the development of melanoma. The expression TRIM7 and TRIM29 appeared to be helpful in the identification of primary tumors and metastases. Survival analysis suggested that the expression of TRIM27 significantly affected the overall survival and disease‐free survival of melanoma, and its expression was confirmed by qRT‐PCR. Our results indicated that the expression level of TRIM27 might be a prognostic marker of melanoma. John Wiley and Sons Inc. 2020-10-28 /pmc/articles/PMC7724299/ /pubmed/33118318 http://dx.doi.org/10.1002/cam4.3545 Text en © 2020 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Cancer Research
Xia, YiJun
Zhao, Jun
Yang, Chunjun
Identification of key genes and pathways for melanoma in the TRIM family
title Identification of key genes and pathways for melanoma in the TRIM family
title_full Identification of key genes and pathways for melanoma in the TRIM family
title_fullStr Identification of key genes and pathways for melanoma in the TRIM family
title_full_unstemmed Identification of key genes and pathways for melanoma in the TRIM family
title_short Identification of key genes and pathways for melanoma in the TRIM family
title_sort identification of key genes and pathways for melanoma in the trim family
topic Clinical Cancer Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7724299/
https://www.ncbi.nlm.nih.gov/pubmed/33118318
http://dx.doi.org/10.1002/cam4.3545
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