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COVID-19 mortality risk assessment: An international multi-center study

Timely identification of COVID-19 patients at high risk of mortality can significantly improve patient management and resource allocation within hospitals. This study seeks to develop and validate a data-driven personalized mortality risk calculator for hospitalized COVID-19 patients. De-identified...

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Autores principales: Bertsimas, Dimitris, Lukin, Galit, Mingardi, Luca, Nohadani, Omid, Orfanoudaki, Agni, Stellato, Bartolomeo, Wiberg, Holly, Gonzalez-Garcia, Sara, Parra-Calderón, Carlos Luis, Robinson, Kenneth, Schneider, Michelle, Stein, Barry, Estirado, Alberto, a Beccara, Lia, Canino, Rosario, Dal Bello, Martina, Pezzetti, Federica, Pan, Angelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7725386/
https://www.ncbi.nlm.nih.gov/pubmed/33296405
http://dx.doi.org/10.1371/journal.pone.0243262
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author Bertsimas, Dimitris
Lukin, Galit
Mingardi, Luca
Nohadani, Omid
Orfanoudaki, Agni
Stellato, Bartolomeo
Wiberg, Holly
Gonzalez-Garcia, Sara
Parra-Calderón, Carlos Luis
Robinson, Kenneth
Schneider, Michelle
Stein, Barry
Estirado, Alberto
a Beccara, Lia
Canino, Rosario
Dal Bello, Martina
Pezzetti, Federica
Pan, Angelo
author_facet Bertsimas, Dimitris
Lukin, Galit
Mingardi, Luca
Nohadani, Omid
Orfanoudaki, Agni
Stellato, Bartolomeo
Wiberg, Holly
Gonzalez-Garcia, Sara
Parra-Calderón, Carlos Luis
Robinson, Kenneth
Schneider, Michelle
Stein, Barry
Estirado, Alberto
a Beccara, Lia
Canino, Rosario
Dal Bello, Martina
Pezzetti, Federica
Pan, Angelo
author_sort Bertsimas, Dimitris
collection PubMed
description Timely identification of COVID-19 patients at high risk of mortality can significantly improve patient management and resource allocation within hospitals. This study seeks to develop and validate a data-driven personalized mortality risk calculator for hospitalized COVID-19 patients. De-identified data was obtained for 3,927 COVID-19 positive patients from six independent centers, comprising 33 different hospitals. Demographic, clinical, and laboratory variables were collected at hospital admission. The COVID-19 Mortality Risk (CMR) tool was developed using the XGBoost algorithm to predict mortality. Its discrimination performance was subsequently evaluated on three validation cohorts. The derivation cohort of 3,062 patients has an observed mortality rate of 26.84%. Increased age, decreased oxygen saturation (≤ 93%), elevated levels of C-reactive protein (≥ 130 mg/L), blood urea nitrogen (≥ 18 mg/dL), and blood creatinine (≥ 1.2 mg/dL) were identified as primary risk factors, validating clinical findings. The model obtains out-of-sample AUCs of 0.90 (95% CI, 0.87–0.94) on the derivation cohort. In the validation cohorts, the model obtains AUCs of 0.92 (95% CI, 0.88–0.95) on Seville patients, 0.87 (95% CI, 0.84–0.91) on Hellenic COVID-19 Study Group patients, and 0.81 (95% CI, 0.76–0.85) on Hartford Hospital patients. The CMR tool is available as an online application at covidanalytics.io/mortality_calculator and is currently in clinical use. The CMR model leverages machine learning to generate accurate mortality predictions using commonly available clinical features. This is the first risk score trained and validated on a cohort of COVID-19 patients from Europe and the United States.
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spelling pubmed-77253862020-12-16 COVID-19 mortality risk assessment: An international multi-center study Bertsimas, Dimitris Lukin, Galit Mingardi, Luca Nohadani, Omid Orfanoudaki, Agni Stellato, Bartolomeo Wiberg, Holly Gonzalez-Garcia, Sara Parra-Calderón, Carlos Luis Robinson, Kenneth Schneider, Michelle Stein, Barry Estirado, Alberto a Beccara, Lia Canino, Rosario Dal Bello, Martina Pezzetti, Federica Pan, Angelo PLoS One Research Article Timely identification of COVID-19 patients at high risk of mortality can significantly improve patient management and resource allocation within hospitals. This study seeks to develop and validate a data-driven personalized mortality risk calculator for hospitalized COVID-19 patients. De-identified data was obtained for 3,927 COVID-19 positive patients from six independent centers, comprising 33 different hospitals. Demographic, clinical, and laboratory variables were collected at hospital admission. The COVID-19 Mortality Risk (CMR) tool was developed using the XGBoost algorithm to predict mortality. Its discrimination performance was subsequently evaluated on three validation cohorts. The derivation cohort of 3,062 patients has an observed mortality rate of 26.84%. Increased age, decreased oxygen saturation (≤ 93%), elevated levels of C-reactive protein (≥ 130 mg/L), blood urea nitrogen (≥ 18 mg/dL), and blood creatinine (≥ 1.2 mg/dL) were identified as primary risk factors, validating clinical findings. The model obtains out-of-sample AUCs of 0.90 (95% CI, 0.87–0.94) on the derivation cohort. In the validation cohorts, the model obtains AUCs of 0.92 (95% CI, 0.88–0.95) on Seville patients, 0.87 (95% CI, 0.84–0.91) on Hellenic COVID-19 Study Group patients, and 0.81 (95% CI, 0.76–0.85) on Hartford Hospital patients. The CMR tool is available as an online application at covidanalytics.io/mortality_calculator and is currently in clinical use. The CMR model leverages machine learning to generate accurate mortality predictions using commonly available clinical features. This is the first risk score trained and validated on a cohort of COVID-19 patients from Europe and the United States. Public Library of Science 2020-12-09 /pmc/articles/PMC7725386/ /pubmed/33296405 http://dx.doi.org/10.1371/journal.pone.0243262 Text en © 2020 Bertsimas et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bertsimas, Dimitris
Lukin, Galit
Mingardi, Luca
Nohadani, Omid
Orfanoudaki, Agni
Stellato, Bartolomeo
Wiberg, Holly
Gonzalez-Garcia, Sara
Parra-Calderón, Carlos Luis
Robinson, Kenneth
Schneider, Michelle
Stein, Barry
Estirado, Alberto
a Beccara, Lia
Canino, Rosario
Dal Bello, Martina
Pezzetti, Federica
Pan, Angelo
COVID-19 mortality risk assessment: An international multi-center study
title COVID-19 mortality risk assessment: An international multi-center study
title_full COVID-19 mortality risk assessment: An international multi-center study
title_fullStr COVID-19 mortality risk assessment: An international multi-center study
title_full_unstemmed COVID-19 mortality risk assessment: An international multi-center study
title_short COVID-19 mortality risk assessment: An international multi-center study
title_sort covid-19 mortality risk assessment: an international multi-center study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7725386/
https://www.ncbi.nlm.nih.gov/pubmed/33296405
http://dx.doi.org/10.1371/journal.pone.0243262
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