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COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2

OBJECTIVES: We report on the key clinical predictors of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and present a clinical decision rule that can risk stratify patients for COVID-19. DESIGN, PARTICIPANTS AND SETTING: A prospective cohort of patients assessed for COVID-19 a...

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Autores principales: Trubiano, Jason A., Vogrin, Sara, Smibert, Olivia C., Marhoon, Nada, Alexander, Adrian A., Chua, Kyra Y. L., James, Fiona L., Jones, Nicholas R. L., Grigg, Sam E., Xu, Cecilia L. H., Moini, Nasreen, Stanley, Sam R., Birrell, Michael T., Rose, Morgan T., Gordon, Claire L., Kwong, Jason C., Holmes, Natasha E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7725390/
https://www.ncbi.nlm.nih.gov/pubmed/33296409
http://dx.doi.org/10.1371/journal.pone.0243414
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author Trubiano, Jason A.
Vogrin, Sara
Smibert, Olivia C.
Marhoon, Nada
Alexander, Adrian A.
Chua, Kyra Y. L.
James, Fiona L.
Jones, Nicholas R. L.
Grigg, Sam E.
Xu, Cecilia L. H.
Moini, Nasreen
Stanley, Sam R.
Birrell, Michael T.
Rose, Morgan T.
Gordon, Claire L.
Kwong, Jason C.
Holmes, Natasha E.
author_facet Trubiano, Jason A.
Vogrin, Sara
Smibert, Olivia C.
Marhoon, Nada
Alexander, Adrian A.
Chua, Kyra Y. L.
James, Fiona L.
Jones, Nicholas R. L.
Grigg, Sam E.
Xu, Cecilia L. H.
Moini, Nasreen
Stanley, Sam R.
Birrell, Michael T.
Rose, Morgan T.
Gordon, Claire L.
Kwong, Jason C.
Holmes, Natasha E.
author_sort Trubiano, Jason A.
collection PubMed
description OBJECTIVES: We report on the key clinical predictors of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and present a clinical decision rule that can risk stratify patients for COVID-19. DESIGN, PARTICIPANTS AND SETTING: A prospective cohort of patients assessed for COVID-19 at a screening clinic in Melbourne, Australia. The primary outcome was a positive COVID-19 test from nasopharyngeal swab. A backwards stepwise logistic regression was used to derive a model of clinical variables predictive of a positive COVID-19 test. Internal validation of the final model was performed using bootstrapped samples and the model scoring derived from the coefficients, with modelling performed for increasing prevalence. RESULTS: Of 4226 patients with suspected COVID-19 who were assessed, 2976 patients underwent SARS-CoV-2 testing (n = 108 SARS-CoV-2 positive) and were used to determine factors associated with a positive COVID-19 test. The 7 features associated with a positive COVID-19 test on multivariable analysis were: COVID-19 patient exposure or international travel, Myalgia/malaise, Anosmia or ageusia, Temperature, Coryza/sore throat, Hypoxia–oxygen saturation < 97%, 65 years or older—summarized in the mnemonic COVID-MATCH65. Internal validation showed an AUC of 0.836. A cut-off of ≥ 1.5 points was associated with a 92.6% sensitivity and 99.5% negative predictive value (NPV) for COVID-19. CONCLUSIONS: From the largest prospective outpatient cohort of suspected COVID-19 we define the clinical factors predictive of a positive SARS-CoV-2 test. The subsequent clinical decision rule, COVID-MATCH65, has a high sensitivity and NPV for SARS-CoV-2 and can be employed in the pandemic, adjusted for disease prevalence, to aid COVID-19 risk-assessment and vital testing resource allocation.
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spelling pubmed-77253902020-12-16 COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2 Trubiano, Jason A. Vogrin, Sara Smibert, Olivia C. Marhoon, Nada Alexander, Adrian A. Chua, Kyra Y. L. James, Fiona L. Jones, Nicholas R. L. Grigg, Sam E. Xu, Cecilia L. H. Moini, Nasreen Stanley, Sam R. Birrell, Michael T. Rose, Morgan T. Gordon, Claire L. Kwong, Jason C. Holmes, Natasha E. PLoS One Research Article OBJECTIVES: We report on the key clinical predictors of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and present a clinical decision rule that can risk stratify patients for COVID-19. DESIGN, PARTICIPANTS AND SETTING: A prospective cohort of patients assessed for COVID-19 at a screening clinic in Melbourne, Australia. The primary outcome was a positive COVID-19 test from nasopharyngeal swab. A backwards stepwise logistic regression was used to derive a model of clinical variables predictive of a positive COVID-19 test. Internal validation of the final model was performed using bootstrapped samples and the model scoring derived from the coefficients, with modelling performed for increasing prevalence. RESULTS: Of 4226 patients with suspected COVID-19 who were assessed, 2976 patients underwent SARS-CoV-2 testing (n = 108 SARS-CoV-2 positive) and were used to determine factors associated with a positive COVID-19 test. The 7 features associated with a positive COVID-19 test on multivariable analysis were: COVID-19 patient exposure or international travel, Myalgia/malaise, Anosmia or ageusia, Temperature, Coryza/sore throat, Hypoxia–oxygen saturation < 97%, 65 years or older—summarized in the mnemonic COVID-MATCH65. Internal validation showed an AUC of 0.836. A cut-off of ≥ 1.5 points was associated with a 92.6% sensitivity and 99.5% negative predictive value (NPV) for COVID-19. CONCLUSIONS: From the largest prospective outpatient cohort of suspected COVID-19 we define the clinical factors predictive of a positive SARS-CoV-2 test. The subsequent clinical decision rule, COVID-MATCH65, has a high sensitivity and NPV for SARS-CoV-2 and can be employed in the pandemic, adjusted for disease prevalence, to aid COVID-19 risk-assessment and vital testing resource allocation. Public Library of Science 2020-12-09 /pmc/articles/PMC7725390/ /pubmed/33296409 http://dx.doi.org/10.1371/journal.pone.0243414 Text en © 2020 Trubiano et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Trubiano, Jason A.
Vogrin, Sara
Smibert, Olivia C.
Marhoon, Nada
Alexander, Adrian A.
Chua, Kyra Y. L.
James, Fiona L.
Jones, Nicholas R. L.
Grigg, Sam E.
Xu, Cecilia L. H.
Moini, Nasreen
Stanley, Sam R.
Birrell, Michael T.
Rose, Morgan T.
Gordon, Claire L.
Kwong, Jason C.
Holmes, Natasha E.
COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title_full COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title_fullStr COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title_full_unstemmed COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title_short COVID-MATCH65—A prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
title_sort covid-match65—a prospectively derived clinical decision rule for severe acute respiratory syndrome coronavirus 2
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7725390/
https://www.ncbi.nlm.nih.gov/pubmed/33296409
http://dx.doi.org/10.1371/journal.pone.0243414
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