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Utilization of Time Series Tools in Life-sciences and Neuroscience

Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and a...

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Detalles Bibliográficos
Autores principales: Gujral, Harshit, Kushwaha, Ajay Kumar, Khurana, Sukant
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7727047/
https://www.ncbi.nlm.nih.gov/pubmed/33345189
http://dx.doi.org/10.1177/2633105520963045
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author Gujral, Harshit
Kushwaha, Ajay Kumar
Khurana, Sukant
author_facet Gujral, Harshit
Kushwaha, Ajay Kumar
Khurana, Sukant
author_sort Gujral, Harshit
collection PubMed
description Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and applications of few classical time series tools, such as Principal Component Analysis, Neural Networks, common Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, in addition to diverse work, generically lumped under time series category. We quantified the usage from two perspectives, one, information technology professionals’, other, researchers utilizing these tools for biomedical and neuroscience research. For understanding trends from the information technology perspective, we evaluated two of the largest open source question and answer databases of Stack Overflow and Cross Validated. We quantified the trends in their application in the biomedical domain, and specifically neuroscience, by searching literature and application usage on PubMed. While the use of all the time series tools continues to gain popularity in general biomedical and life science research, and also neuroscience, and so have been the total number of questions asked on Stack overflow and Cross Validated, the total views to questions on these are on a decrease in recent years, indicating well established texts, algorithms, and libraries, resulting in engineers not looking for what used to be common questions a few years back. The use of these tools in neuroscience clearly leaves room for improvement.
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spelling pubmed-77270472020-12-18 Utilization of Time Series Tools in Life-sciences and Neuroscience Gujral, Harshit Kushwaha, Ajay Kumar Khurana, Sukant Neurosci Insights Original Research Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and applications of few classical time series tools, such as Principal Component Analysis, Neural Networks, common Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, in addition to diverse work, generically lumped under time series category. We quantified the usage from two perspectives, one, information technology professionals’, other, researchers utilizing these tools for biomedical and neuroscience research. For understanding trends from the information technology perspective, we evaluated two of the largest open source question and answer databases of Stack Overflow and Cross Validated. We quantified the trends in their application in the biomedical domain, and specifically neuroscience, by searching literature and application usage on PubMed. While the use of all the time series tools continues to gain popularity in general biomedical and life science research, and also neuroscience, and so have been the total number of questions asked on Stack overflow and Cross Validated, the total views to questions on these are on a decrease in recent years, indicating well established texts, algorithms, and libraries, resulting in engineers not looking for what used to be common questions a few years back. The use of these tools in neuroscience clearly leaves room for improvement. SAGE Publications 2020-12-08 /pmc/articles/PMC7727047/ /pubmed/33345189 http://dx.doi.org/10.1177/2633105520963045 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Gujral, Harshit
Kushwaha, Ajay Kumar
Khurana, Sukant
Utilization of Time Series Tools in Life-sciences and Neuroscience
title Utilization of Time Series Tools in Life-sciences and Neuroscience
title_full Utilization of Time Series Tools in Life-sciences and Neuroscience
title_fullStr Utilization of Time Series Tools in Life-sciences and Neuroscience
title_full_unstemmed Utilization of Time Series Tools in Life-sciences and Neuroscience
title_short Utilization of Time Series Tools in Life-sciences and Neuroscience
title_sort utilization of time series tools in life-sciences and neuroscience
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7727047/
https://www.ncbi.nlm.nih.gov/pubmed/33345189
http://dx.doi.org/10.1177/2633105520963045
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