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Utilization of Time Series Tools in Life-sciences and Neuroscience
Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7727047/ https://www.ncbi.nlm.nih.gov/pubmed/33345189 http://dx.doi.org/10.1177/2633105520963045 |
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author | Gujral, Harshit Kushwaha, Ajay Kumar Khurana, Sukant |
author_facet | Gujral, Harshit Kushwaha, Ajay Kumar Khurana, Sukant |
author_sort | Gujral, Harshit |
collection | PubMed |
description | Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and applications of few classical time series tools, such as Principal Component Analysis, Neural Networks, common Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, in addition to diverse work, generically lumped under time series category. We quantified the usage from two perspectives, one, information technology professionals’, other, researchers utilizing these tools for biomedical and neuroscience research. For understanding trends from the information technology perspective, we evaluated two of the largest open source question and answer databases of Stack Overflow and Cross Validated. We quantified the trends in their application in the biomedical domain, and specifically neuroscience, by searching literature and application usage on PubMed. While the use of all the time series tools continues to gain popularity in general biomedical and life science research, and also neuroscience, and so have been the total number of questions asked on Stack overflow and Cross Validated, the total views to questions on these are on a decrease in recent years, indicating well established texts, algorithms, and libraries, resulting in engineers not looking for what used to be common questions a few years back. The use of these tools in neuroscience clearly leaves room for improvement. |
format | Online Article Text |
id | pubmed-7727047 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-77270472020-12-18 Utilization of Time Series Tools in Life-sciences and Neuroscience Gujral, Harshit Kushwaha, Ajay Kumar Khurana, Sukant Neurosci Insights Original Research Time series tools are part and parcel of modern day research. Their usage in the biomedical field; specifically, in neuroscience, has not been previously quantified. A quantification of trends can tell about lacunae in the current uses and point towards future uses. We evaluated the principles and applications of few classical time series tools, such as Principal Component Analysis, Neural Networks, common Auto-regression Models, Markov Models, Hidden Markov Models, Fourier Analysis, Spectral Analysis, in addition to diverse work, generically lumped under time series category. We quantified the usage from two perspectives, one, information technology professionals’, other, researchers utilizing these tools for biomedical and neuroscience research. For understanding trends from the information technology perspective, we evaluated two of the largest open source question and answer databases of Stack Overflow and Cross Validated. We quantified the trends in their application in the biomedical domain, and specifically neuroscience, by searching literature and application usage on PubMed. While the use of all the time series tools continues to gain popularity in general biomedical and life science research, and also neuroscience, and so have been the total number of questions asked on Stack overflow and Cross Validated, the total views to questions on these are on a decrease in recent years, indicating well established texts, algorithms, and libraries, resulting in engineers not looking for what used to be common questions a few years back. The use of these tools in neuroscience clearly leaves room for improvement. SAGE Publications 2020-12-08 /pmc/articles/PMC7727047/ /pubmed/33345189 http://dx.doi.org/10.1177/2633105520963045 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Gujral, Harshit Kushwaha, Ajay Kumar Khurana, Sukant Utilization of Time Series Tools in Life-sciences and Neuroscience |
title | Utilization of Time Series Tools in Life-sciences and Neuroscience |
title_full | Utilization of Time Series Tools in Life-sciences and Neuroscience |
title_fullStr | Utilization of Time Series Tools in Life-sciences and Neuroscience |
title_full_unstemmed | Utilization of Time Series Tools in Life-sciences and Neuroscience |
title_short | Utilization of Time Series Tools in Life-sciences and Neuroscience |
title_sort | utilization of time series tools in life-sciences and neuroscience |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7727047/ https://www.ncbi.nlm.nih.gov/pubmed/33345189 http://dx.doi.org/10.1177/2633105520963045 |
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