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Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana

Cycloastragenol (CAG), a molecule isolated from ‘Astragalus membranaceus’, stimulates the telomerase activity and cell proliferation significantly. It has been proven that CAG has the ability to prevent some diseases in humans. In this study, we aimed to figure out the CAG effects on the different s...

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Autores principales: Mhiri, Wissem, Ceylan, Merve, Turgut-Kara, Neslihan, Nalbantoğlu, Barbaros, Çakır, Özgür
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7728452/
https://www.ncbi.nlm.nih.gov/pubmed/33301486
http://dx.doi.org/10.1371/journal.pone.0242986
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author Mhiri, Wissem
Ceylan, Merve
Turgut-Kara, Neslihan
Nalbantoğlu, Barbaros
Çakır, Özgür
author_facet Mhiri, Wissem
Ceylan, Merve
Turgut-Kara, Neslihan
Nalbantoğlu, Barbaros
Çakır, Özgür
author_sort Mhiri, Wissem
collection PubMed
description Cycloastragenol (CAG), a molecule isolated from ‘Astragalus membranaceus’, stimulates the telomerase activity and cell proliferation significantly. It has been proven that CAG has the ability to prevent some diseases in humans. In this study, we aimed to figure out the CAG effects on the different signaling mechanisms in plants and to broadly analyze the genome-wide transcriptional responses in order to demonstrate CAG as a new key molecule that can potentially help plants to overcome different environmental stresses. RNA-seq strategy was employed to assess the transcriptional profiles in A. thaliana calli. Our work primarily focused on an overall study on the transcriptomic responses of A. thaliana to CAG. A total of 22593 unigenes have been detected, among which 1045 unigenes associated with 213 GO terms were differentially expressed and were assigned to 118 KEGG pathways. The up-regulated genes are principally involved in cellular and metabolic processes in addition to the response to a stimulus. The data analysis revealed genes associated with defense signaling pathways such as cytochrome P450s transporter, antioxidant system genes, and stress-responsive protein families were significantly upregulated. The obtained results can potentially help in better understanding biotic and/or abiotic tolerance mechanisms in response to CAG.
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spelling pubmed-77284522020-12-17 Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana Mhiri, Wissem Ceylan, Merve Turgut-Kara, Neslihan Nalbantoğlu, Barbaros Çakır, Özgür PLoS One Research Article Cycloastragenol (CAG), a molecule isolated from ‘Astragalus membranaceus’, stimulates the telomerase activity and cell proliferation significantly. It has been proven that CAG has the ability to prevent some diseases in humans. In this study, we aimed to figure out the CAG effects on the different signaling mechanisms in plants and to broadly analyze the genome-wide transcriptional responses in order to demonstrate CAG as a new key molecule that can potentially help plants to overcome different environmental stresses. RNA-seq strategy was employed to assess the transcriptional profiles in A. thaliana calli. Our work primarily focused on an overall study on the transcriptomic responses of A. thaliana to CAG. A total of 22593 unigenes have been detected, among which 1045 unigenes associated with 213 GO terms were differentially expressed and were assigned to 118 KEGG pathways. The up-regulated genes are principally involved in cellular and metabolic processes in addition to the response to a stimulus. The data analysis revealed genes associated with defense signaling pathways such as cytochrome P450s transporter, antioxidant system genes, and stress-responsive protein families were significantly upregulated. The obtained results can potentially help in better understanding biotic and/or abiotic tolerance mechanisms in response to CAG. Public Library of Science 2020-12-10 /pmc/articles/PMC7728452/ /pubmed/33301486 http://dx.doi.org/10.1371/journal.pone.0242986 Text en © 2020 Mhiri et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Mhiri, Wissem
Ceylan, Merve
Turgut-Kara, Neslihan
Nalbantoğlu, Barbaros
Çakır, Özgür
Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title_full Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title_fullStr Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title_full_unstemmed Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title_short Transcriptomic analysis reveals responses to Cycloastragenol in Arabidopsis thaliana
title_sort transcriptomic analysis reveals responses to cycloastragenol in arabidopsis thaliana
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7728452/
https://www.ncbi.nlm.nih.gov/pubmed/33301486
http://dx.doi.org/10.1371/journal.pone.0242986
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