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Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property
It remains undeciphered how thermophilic enzymes display enhanced stability at elevated temperatures. Taking l-asparaginase from P. furiosus (PfA) as an example, we combined scattering shapes deduced from small-angle X-ray scattering (SAXS) data at increased temperatures with symmetry mates from cry...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7728782/ https://www.ncbi.nlm.nih.gov/pubmed/33303914 http://dx.doi.org/10.1038/s41598-020-78877-z |
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author | Sharma, Pankaj Tomar, Rachana Yadav, Shivpratap Singh Badmalia, Maulik D. Nath, Samir Kumar Ashish Kundu, Bishwajit |
author_facet | Sharma, Pankaj Tomar, Rachana Yadav, Shivpratap Singh Badmalia, Maulik D. Nath, Samir Kumar Ashish Kundu, Bishwajit |
author_sort | Sharma, Pankaj |
collection | PubMed |
description | It remains undeciphered how thermophilic enzymes display enhanced stability at elevated temperatures. Taking l-asparaginase from P. furiosus (PfA) as an example, we combined scattering shapes deduced from small-angle X-ray scattering (SAXS) data at increased temperatures with symmetry mates from crystallographic structures to find that heating caused end-to-end association. The small contact point of self-binding appeared to be enabled by a terminal short β-strand in N-terminal domain, Leu(179)-Val-Val-Asn(182) (LVVN). Interestingly, deletion of this strand led to a defunct enzyme, whereas suplementation of the peptide LVVN to the defunct enzyme restored structural frameworkwith mesophile-type functionality. Crystal structure of the peptide-bound defunct enzyme showed that one peptide ispresent in the same coordinates as in original enzyme, explaining gain-of lost function. A second peptide was seen bound to the protein at a different location suggesting its possible role in substrate-free molecular-association. Overall, we show that the heating induced self-assembly of native shapes of PfA led to an apparent super-stable assembly. |
format | Online Article Text |
id | pubmed-7728782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-77287822020-12-14 Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property Sharma, Pankaj Tomar, Rachana Yadav, Shivpratap Singh Badmalia, Maulik D. Nath, Samir Kumar Ashish Kundu, Bishwajit Sci Rep Article It remains undeciphered how thermophilic enzymes display enhanced stability at elevated temperatures. Taking l-asparaginase from P. furiosus (PfA) as an example, we combined scattering shapes deduced from small-angle X-ray scattering (SAXS) data at increased temperatures with symmetry mates from crystallographic structures to find that heating caused end-to-end association. The small contact point of self-binding appeared to be enabled by a terminal short β-strand in N-terminal domain, Leu(179)-Val-Val-Asn(182) (LVVN). Interestingly, deletion of this strand led to a defunct enzyme, whereas suplementation of the peptide LVVN to the defunct enzyme restored structural frameworkwith mesophile-type functionality. Crystal structure of the peptide-bound defunct enzyme showed that one peptide ispresent in the same coordinates as in original enzyme, explaining gain-of lost function. A second peptide was seen bound to the protein at a different location suggesting its possible role in substrate-free molecular-association. Overall, we show that the heating induced self-assembly of native shapes of PfA led to an apparent super-stable assembly. Nature Publishing Group UK 2020-12-10 /pmc/articles/PMC7728782/ /pubmed/33303914 http://dx.doi.org/10.1038/s41598-020-78877-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Sharma, Pankaj Tomar, Rachana Yadav, Shivpratap Singh Badmalia, Maulik D. Nath, Samir Kumar Ashish Kundu, Bishwajit Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title | Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title_full | Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title_fullStr | Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title_full_unstemmed | Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title_short | Heat induces end to end repetitive association in P. furiosusl-asparaginase which enables its thermophilic property |
title_sort | heat induces end to end repetitive association in p. furiosusl-asparaginase which enables its thermophilic property |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7728782/ https://www.ncbi.nlm.nih.gov/pubmed/33303914 http://dx.doi.org/10.1038/s41598-020-78877-z |
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