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Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning

OBJECTIVE: To establish a classifier for accurately predicting the overall survival of gallbladder cancer (GBC) patients by analyzing pre-treatment CT images using machine learning technology. METHODS: This retrospective study included 141 patients with pathologically confirmed GBC. After obtaining...

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Autores principales: Liu, Zefan, Zhu, Guannan, Jiang, Xian, Zhao, Yunuo, Zeng, Hao, Jing, Jing, Ma, Xuelei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7729190/
https://www.ncbi.nlm.nih.gov/pubmed/33330105
http://dx.doi.org/10.3389/fonc.2020.604288
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author Liu, Zefan
Zhu, Guannan
Jiang, Xian
Zhao, Yunuo
Zeng, Hao
Jing, Jing
Ma, Xuelei
author_facet Liu, Zefan
Zhu, Guannan
Jiang, Xian
Zhao, Yunuo
Zeng, Hao
Jing, Jing
Ma, Xuelei
author_sort Liu, Zefan
collection PubMed
description OBJECTIVE: To establish a classifier for accurately predicting the overall survival of gallbladder cancer (GBC) patients by analyzing pre-treatment CT images using machine learning technology. METHODS: This retrospective study included 141 patients with pathologically confirmed GBC. After obtaining the pre-treatment CT images, manual segmentation of the tumor lesion was performed and LIFEx package was used to extract the tumor signature. Next, LASSO and Random Forest methods were used to optimize and model. Finally, the clinical information was combined to accurately predict the survival outcomes of GBC patients. RESULTS: Fifteen CT features were selected through LASSO and random forest. On the basis of relative importance GLZLM-HGZE, GLCM-homogeneity and NGLDM-coarseness were included in the final model. The hazard ratio of the CT-based model was 1.462(95% CI: 1.014–2.107). According to the median of risk score, all patients were divided into high and low risk groups, and survival analysis showed that high-risk groups had a poor survival outcome (P = 0.012). After inclusion of clinical factors, we used multivariate COX to classify patients with GBC. The AUC values in the test set and validation set for 3 years reached 0.79 and 0.73, respectively. CONCLUSION: GBC survival outcomes could be predicted by radiomics based on LASSO and Random Forest.
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spelling pubmed-77291902020-12-15 Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning Liu, Zefan Zhu, Guannan Jiang, Xian Zhao, Yunuo Zeng, Hao Jing, Jing Ma, Xuelei Front Oncol Oncology OBJECTIVE: To establish a classifier for accurately predicting the overall survival of gallbladder cancer (GBC) patients by analyzing pre-treatment CT images using machine learning technology. METHODS: This retrospective study included 141 patients with pathologically confirmed GBC. After obtaining the pre-treatment CT images, manual segmentation of the tumor lesion was performed and LIFEx package was used to extract the tumor signature. Next, LASSO and Random Forest methods were used to optimize and model. Finally, the clinical information was combined to accurately predict the survival outcomes of GBC patients. RESULTS: Fifteen CT features were selected through LASSO and random forest. On the basis of relative importance GLZLM-HGZE, GLCM-homogeneity and NGLDM-coarseness were included in the final model. The hazard ratio of the CT-based model was 1.462(95% CI: 1.014–2.107). According to the median of risk score, all patients were divided into high and low risk groups, and survival analysis showed that high-risk groups had a poor survival outcome (P = 0.012). After inclusion of clinical factors, we used multivariate COX to classify patients with GBC. The AUC values in the test set and validation set for 3 years reached 0.79 and 0.73, respectively. CONCLUSION: GBC survival outcomes could be predicted by radiomics based on LASSO and Random Forest. Frontiers Media S.A. 2020-11-27 /pmc/articles/PMC7729190/ /pubmed/33330105 http://dx.doi.org/10.3389/fonc.2020.604288 Text en Copyright © 2020 Liu, Zhu, Jiang, Zhao, Zeng, Jing and Ma http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Liu, Zefan
Zhu, Guannan
Jiang, Xian
Zhao, Yunuo
Zeng, Hao
Jing, Jing
Ma, Xuelei
Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title_full Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title_fullStr Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title_full_unstemmed Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title_short Survival Prediction in Gallbladder Cancer Using CT Based Machine Learning
title_sort survival prediction in gallbladder cancer using ct based machine learning
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7729190/
https://www.ncbi.nlm.nih.gov/pubmed/33330105
http://dx.doi.org/10.3389/fonc.2020.604288
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