Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data

We present a retrospective analysis of strains from two anthrax outbreaks in western Kazakhstan in 2009. The outbreaks occurred during the same period and in the same area located close to main roads, favoring a single source of infection. However, multilocus variable-number tandem-repeat analysis (...

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Autores principales: Shevtsov, Alexandr, Vergnaud, Gilles, Amirgazin, Asylulan, Lukhnova, Larissa, Izbanova, Uinkul, Shevtsov, Vladislav, Ramankulov, Yerlan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7729412/
https://www.ncbi.nlm.nih.gov/pubmed/33303664
http://dx.doi.org/10.1128/MRA.01126-20
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author Shevtsov, Alexandr
Vergnaud, Gilles
Amirgazin, Asylulan
Lukhnova, Larissa
Izbanova, Uinkul
Shevtsov, Vladislav
Ramankulov, Yerlan
author_facet Shevtsov, Alexandr
Vergnaud, Gilles
Amirgazin, Asylulan
Lukhnova, Larissa
Izbanova, Uinkul
Shevtsov, Vladislav
Ramankulov, Yerlan
author_sort Shevtsov, Alexandr
collection PubMed
description We present a retrospective analysis of strains from two anthrax outbreaks in western Kazakhstan in 2009. The outbreaks occurred during the same period and in the same area located close to main roads, favoring a single source of infection. However, multilocus variable-number tandem-repeat analysis (MLVA), canonical single-nucleotide polymorphism (CanSNP) analysis, and genome-wide analysis demonstrated that the outbreaks were not connected.
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spelling pubmed-77294122020-12-30 Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data Shevtsov, Alexandr Vergnaud, Gilles Amirgazin, Asylulan Lukhnova, Larissa Izbanova, Uinkul Shevtsov, Vladislav Ramankulov, Yerlan Microbiol Resour Announc Genome Sequences We present a retrospective analysis of strains from two anthrax outbreaks in western Kazakhstan in 2009. The outbreaks occurred during the same period and in the same area located close to main roads, favoring a single source of infection. However, multilocus variable-number tandem-repeat analysis (MLVA), canonical single-nucleotide polymorphism (CanSNP) analysis, and genome-wide analysis demonstrated that the outbreaks were not connected. American Society for Microbiology 2020-12-10 /pmc/articles/PMC7729412/ /pubmed/33303664 http://dx.doi.org/10.1128/MRA.01126-20 Text en Copyright © 2020 Shevtsov et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Shevtsov, Alexandr
Vergnaud, Gilles
Amirgazin, Asylulan
Lukhnova, Larissa
Izbanova, Uinkul
Shevtsov, Vladislav
Ramankulov, Yerlan
Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title_full Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title_fullStr Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title_full_unstemmed Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title_short Retrospective Analysis of the Relationship between Two Anthrax Outbreaks in Kazakhstan Based on Genomic Data
title_sort retrospective analysis of the relationship between two anthrax outbreaks in kazakhstan based on genomic data
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7729412/
https://www.ncbi.nlm.nih.gov/pubmed/33303664
http://dx.doi.org/10.1128/MRA.01126-20
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