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POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer
The effect of POC1 centriolar protein A (POC1A) on gastric cancer (GC) has not been clearly defined. In this study, POC1A expression and clinical information in patients with GC were analyzed. Multiple databases were used to investigate the genes that were co-expressed with POC1A and genes whose cha...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732308/ https://www.ncbi.nlm.nih.gov/pubmed/33052878 http://dx.doi.org/10.18632/aging.103624 |
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author | Lu, Jun Huang, Xiao-Yan Wang, Yao-Hui Xie, Jian-Wei Wang, Jia-Bin Lin, Jian-Xian Chen, Qi-Yue Cao, Long-Long Li, Ping Huang, Chang-Ming Zheng, Chao-Hui |
author_facet | Lu, Jun Huang, Xiao-Yan Wang, Yao-Hui Xie, Jian-Wei Wang, Jia-Bin Lin, Jian-Xian Chen, Qi-Yue Cao, Long-Long Li, Ping Huang, Chang-Ming Zheng, Chao-Hui |
author_sort | Lu, Jun |
collection | PubMed |
description | The effect of POC1 centriolar protein A (POC1A) on gastric cancer (GC) has not been clearly defined. In this study, POC1A expression and clinical information in patients with GC were analyzed. Multiple databases were used to investigate the genes that were co-expressed with POC1A and genes whose changes co-occurred with genetic alternations of POC1A. Moreover, the TISIDB and TIMER databases were used to analyze immune infiltration. The GSE54129 GC dataset and LASSO regression model (tumor vs. normal) were employed, and 6 significant differentially expressed genes (LAMP5, CEBPB, ARMC9, PAOX, VMP1, POC1A) were identified. POC1A was selected for its high expression in adjacent tissues, which was confirmed with IHC. High POC1A expression was related to better overall and recurrence-free survival. GO and KEGG analyses demonstrated that POC1A may regulate the cell cycle, DNA replication and cell growth. Furthermore, POC1A was found to be correlated with immune infiltration levels in GC according to the TISIDB and TIMER databases. These findings indicate that POC1A acts as a tumor suppressor in GC by regulating the cell cycle and cell growth. In addition, POC1A preferentially regulates the immune infiltration of GC via several immune genes. However, the specific mechanism requires further study. |
format | Online Article Text |
id | pubmed-7732308 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-77323082020-12-18 POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer Lu, Jun Huang, Xiao-Yan Wang, Yao-Hui Xie, Jian-Wei Wang, Jia-Bin Lin, Jian-Xian Chen, Qi-Yue Cao, Long-Long Li, Ping Huang, Chang-Ming Zheng, Chao-Hui Aging (Albany NY) Research Paper The effect of POC1 centriolar protein A (POC1A) on gastric cancer (GC) has not been clearly defined. In this study, POC1A expression and clinical information in patients with GC were analyzed. Multiple databases were used to investigate the genes that were co-expressed with POC1A and genes whose changes co-occurred with genetic alternations of POC1A. Moreover, the TISIDB and TIMER databases were used to analyze immune infiltration. The GSE54129 GC dataset and LASSO regression model (tumor vs. normal) were employed, and 6 significant differentially expressed genes (LAMP5, CEBPB, ARMC9, PAOX, VMP1, POC1A) were identified. POC1A was selected for its high expression in adjacent tissues, which was confirmed with IHC. High POC1A expression was related to better overall and recurrence-free survival. GO and KEGG analyses demonstrated that POC1A may regulate the cell cycle, DNA replication and cell growth. Furthermore, POC1A was found to be correlated with immune infiltration levels in GC according to the TISIDB and TIMER databases. These findings indicate that POC1A acts as a tumor suppressor in GC by regulating the cell cycle and cell growth. In addition, POC1A preferentially regulates the immune infiltration of GC via several immune genes. However, the specific mechanism requires further study. Impact Journals 2020-10-14 /pmc/articles/PMC7732308/ /pubmed/33052878 http://dx.doi.org/10.18632/aging.103624 Text en Copyright: © 2020 Lu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Lu, Jun Huang, Xiao-Yan Wang, Yao-Hui Xie, Jian-Wei Wang, Jia-Bin Lin, Jian-Xian Chen, Qi-Yue Cao, Long-Long Li, Ping Huang, Chang-Ming Zheng, Chao-Hui POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title | POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title_full | POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title_fullStr | POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title_full_unstemmed | POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title_short | POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
title_sort | poc1a acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732308/ https://www.ncbi.nlm.nih.gov/pubmed/33052878 http://dx.doi.org/10.18632/aging.103624 |
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