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Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets
BACKGROUND: As the important components in polycomb repressive complexes 1 (PRC1) and heterochromatin protein 1 (HP1), Chromobox (CBX) family members are involved in epigenetic regulatory function, transcriptional repression, and other cellular metabolisms. Increasing studies have indicated signific...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732380/ https://www.ncbi.nlm.nih.gov/pubmed/33344640 http://dx.doi.org/10.1155/2020/5306509 |
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author | Chen, Zhuo-Yuan Sun, Shang-Xing Zhu, Si-Xian Bu, Jie |
author_facet | Chen, Zhuo-Yuan Sun, Shang-Xing Zhu, Si-Xian Bu, Jie |
author_sort | Chen, Zhuo-Yuan |
collection | PubMed |
description | BACKGROUND: As the important components in polycomb repressive complexes 1 (PRC1) and heterochromatin protein 1 (HP1), Chromobox (CBX) family members are involved in epigenetic regulatory function, transcriptional repression, and other cellular metabolisms. Increasing studies have indicated significant associations between CBX and tumorigenesis, which is a progression in different types of cancers. However, the information about the roles of each CBX in gastric cancer is extremely limited. METHODS: We explored CBX mRNA expression, corrections with clinicopathological parameters, protein expression, prognostic values, enrichment analysis with several databases including Oncomine, Human Protein Atlas, UALCAN, Kaplan-Meier plotter, cBioPortal, GeneMANIA, and Enrichr. RESULTS: In our study, comparing to the normal tissues, higher mRNA expression of CBX1/2/3/4/5/8 and lower mRNA expression of CBX7 were found in GC tissues while upregulations of CBX1/2/3/4/5/8 and downregulations of CBX7 were indicated to be significantly correlated to the nodal metastasis status and individual cancer stages in GC patients. As for protein level, the expression of CBX2/3/4/5/6 was higher and the expression of CBX7 was lower in the GC tissues than those in the normal. What is more, higher mRNA expression of CBX1/5/6/8 and lower mRNA expression of CBX7 were markedly correlated to poor outcomes of OS and FP in GC patients. Besides, high mutation rate of CBXs (42%) was observed in GC patients. CONCLUSIONS: We suggest that CBX5/7 may serve as potential therapeutic targets for GC while CBX1/8 may serve as potential prognostic indicators for GC. |
format | Online Article Text |
id | pubmed-7732380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-77323802020-12-18 Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets Chen, Zhuo-Yuan Sun, Shang-Xing Zhu, Si-Xian Bu, Jie Biomed Res Int Research Article BACKGROUND: As the important components in polycomb repressive complexes 1 (PRC1) and heterochromatin protein 1 (HP1), Chromobox (CBX) family members are involved in epigenetic regulatory function, transcriptional repression, and other cellular metabolisms. Increasing studies have indicated significant associations between CBX and tumorigenesis, which is a progression in different types of cancers. However, the information about the roles of each CBX in gastric cancer is extremely limited. METHODS: We explored CBX mRNA expression, corrections with clinicopathological parameters, protein expression, prognostic values, enrichment analysis with several databases including Oncomine, Human Protein Atlas, UALCAN, Kaplan-Meier plotter, cBioPortal, GeneMANIA, and Enrichr. RESULTS: In our study, comparing to the normal tissues, higher mRNA expression of CBX1/2/3/4/5/8 and lower mRNA expression of CBX7 were found in GC tissues while upregulations of CBX1/2/3/4/5/8 and downregulations of CBX7 were indicated to be significantly correlated to the nodal metastasis status and individual cancer stages in GC patients. As for protein level, the expression of CBX2/3/4/5/6 was higher and the expression of CBX7 was lower in the GC tissues than those in the normal. What is more, higher mRNA expression of CBX1/5/6/8 and lower mRNA expression of CBX7 were markedly correlated to poor outcomes of OS and FP in GC patients. Besides, high mutation rate of CBXs (42%) was observed in GC patients. CONCLUSIONS: We suggest that CBX5/7 may serve as potential therapeutic targets for GC while CBX1/8 may serve as potential prognostic indicators for GC. Hindawi 2020-11-05 /pmc/articles/PMC7732380/ /pubmed/33344640 http://dx.doi.org/10.1155/2020/5306509 Text en Copyright © 2020 Zhuo-Yuan Chen et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Chen, Zhuo-Yuan Sun, Shang-Xing Zhu, Si-Xian Bu, Jie Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title | Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title_full | Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title_fullStr | Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title_full_unstemmed | Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title_short | Identification of the Roles of Chromobox Family Members in Gastric Cancer: A Study Based on Multiple Datasets |
title_sort | identification of the roles of chromobox family members in gastric cancer: a study based on multiple datasets |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732380/ https://www.ncbi.nlm.nih.gov/pubmed/33344640 http://dx.doi.org/10.1155/2020/5306509 |
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