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Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach

Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on p...

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Autores principales: Suzuki, Yuta, Hino, Hideitsu, Hawai, Takafumi, Saito, Kotaro, Kotsugi, Masato, Ono, Kanta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732852/
https://www.ncbi.nlm.nih.gov/pubmed/33311555
http://dx.doi.org/10.1038/s41598-020-77474-4
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author Suzuki, Yuta
Hino, Hideitsu
Hawai, Takafumi
Saito, Kotaro
Kotsugi, Masato
Ono, Kanta
author_facet Suzuki, Yuta
Hino, Hideitsu
Hawai, Takafumi
Saito, Kotaro
Kotsugi, Masato
Ono, Kanta
author_sort Suzuki, Yuta
collection PubMed
description Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on powder X-ray diffraction (XRD) patterns as a proof of concept using simulated patterns. Our tree-ensemble-based ML model works with nearly or over 90% accuracy for crystal system classification, except for triclinic cases, and with 88% accuracy for space group classification with five candidates. We also succeeded in quantifying empirical knowledge vaguely shared among experts, showing the possibility for data-driven discovery of unrecognised characteristics embedded in experimental data by using an interpretable ML approach.
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spelling pubmed-77328522020-12-14 Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach Suzuki, Yuta Hino, Hideitsu Hawai, Takafumi Saito, Kotaro Kotsugi, Masato Ono, Kanta Sci Rep Article Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on powder X-ray diffraction (XRD) patterns as a proof of concept using simulated patterns. Our tree-ensemble-based ML model works with nearly or over 90% accuracy for crystal system classification, except for triclinic cases, and with 88% accuracy for space group classification with five candidates. We also succeeded in quantifying empirical knowledge vaguely shared among experts, showing the possibility for data-driven discovery of unrecognised characteristics embedded in experimental data by using an interpretable ML approach. Nature Publishing Group UK 2020-12-11 /pmc/articles/PMC7732852/ /pubmed/33311555 http://dx.doi.org/10.1038/s41598-020-77474-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Suzuki, Yuta
Hino, Hideitsu
Hawai, Takafumi
Saito, Kotaro
Kotsugi, Masato
Ono, Kanta
Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title_full Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title_fullStr Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title_full_unstemmed Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title_short Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
title_sort symmetry prediction and knowledge discovery from x-ray diffraction patterns using an interpretable machine learning approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732852/
https://www.ncbi.nlm.nih.gov/pubmed/33311555
http://dx.doi.org/10.1038/s41598-020-77474-4
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