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Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach
Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on p...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732852/ https://www.ncbi.nlm.nih.gov/pubmed/33311555 http://dx.doi.org/10.1038/s41598-020-77474-4 |
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author | Suzuki, Yuta Hino, Hideitsu Hawai, Takafumi Saito, Kotaro Kotsugi, Masato Ono, Kanta |
author_facet | Suzuki, Yuta Hino, Hideitsu Hawai, Takafumi Saito, Kotaro Kotsugi, Masato Ono, Kanta |
author_sort | Suzuki, Yuta |
collection | PubMed |
description | Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on powder X-ray diffraction (XRD) patterns as a proof of concept using simulated patterns. Our tree-ensemble-based ML model works with nearly or over 90% accuracy for crystal system classification, except for triclinic cases, and with 88% accuracy for space group classification with five candidates. We also succeeded in quantifying empirical knowledge vaguely shared among experts, showing the possibility for data-driven discovery of unrecognised characteristics embedded in experimental data by using an interpretable ML approach. |
format | Online Article Text |
id | pubmed-7732852 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-77328522020-12-14 Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach Suzuki, Yuta Hino, Hideitsu Hawai, Takafumi Saito, Kotaro Kotsugi, Masato Ono, Kanta Sci Rep Article Determination of crystal system and space group in the initial stages of crystal structure analysis forms a bottleneck in material science workflow that often requires manual tuning. Herein we propose a machine-learning (ML)-based approach for crystal system and space group classification based on powder X-ray diffraction (XRD) patterns as a proof of concept using simulated patterns. Our tree-ensemble-based ML model works with nearly or over 90% accuracy for crystal system classification, except for triclinic cases, and with 88% accuracy for space group classification with five candidates. We also succeeded in quantifying empirical knowledge vaguely shared among experts, showing the possibility for data-driven discovery of unrecognised characteristics embedded in experimental data by using an interpretable ML approach. Nature Publishing Group UK 2020-12-11 /pmc/articles/PMC7732852/ /pubmed/33311555 http://dx.doi.org/10.1038/s41598-020-77474-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Suzuki, Yuta Hino, Hideitsu Hawai, Takafumi Saito, Kotaro Kotsugi, Masato Ono, Kanta Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title | Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title_full | Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title_fullStr | Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title_full_unstemmed | Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title_short | Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach |
title_sort | symmetry prediction and knowledge discovery from x-ray diffraction patterns using an interpretable machine learning approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732852/ https://www.ncbi.nlm.nih.gov/pubmed/33311555 http://dx.doi.org/10.1038/s41598-020-77474-4 |
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