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Automatic seizure detection based on imaged-EEG signals through fully convolutional networks

Seizure detection is a routine process in epilepsy units requiring manual intervention of well-trained specialists. This process could be extensive, inefficient and time-consuming, especially for long term recordings. We proposed an automatic method to detect epileptic seizures using an imaged-EEG r...

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Autores principales: Gómez, Catalina, Arbeláez, Pablo, Navarrete, Miguel, Alvarado-Rojas, Catalina, Le Van Quyen, Michel, Valderrama, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732993/
https://www.ncbi.nlm.nih.gov/pubmed/33311533
http://dx.doi.org/10.1038/s41598-020-78784-3
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author Gómez, Catalina
Arbeláez, Pablo
Navarrete, Miguel
Alvarado-Rojas, Catalina
Le Van Quyen, Michel
Valderrama, Mario
author_facet Gómez, Catalina
Arbeláez, Pablo
Navarrete, Miguel
Alvarado-Rojas, Catalina
Le Van Quyen, Michel
Valderrama, Mario
author_sort Gómez, Catalina
collection PubMed
description Seizure detection is a routine process in epilepsy units requiring manual intervention of well-trained specialists. This process could be extensive, inefficient and time-consuming, especially for long term recordings. We proposed an automatic method to detect epileptic seizures using an imaged-EEG representation of brain signals. To accomplish this, we analyzed EEG signals from two different datasets: the CHB-MIT Scalp EEG database and the EPILEPSIAE project that includes scalp and intracranial recordings. We used fully convolutional neural networks to automatically detect seizures. For our best model, we reached average accuracy and specificity values of 99.3% and 99.6%, respectively, for the CHB-MIT dataset, and corresponding values of 98.0% and 98.3% for the EPILEPSIAE patients. For these patients, the inclusion of intracranial electrodes together with scalp ones increased the average accuracy and specificity values to 99.6% and 58.3%, respectively. Regarding the other metrics, our best model reached average precision of 62.7%, recall of 58.3%, F-measure of 59.0% and AP of 54.5% on the CHB-MIT recordings, and comparatively lowers performances for the EPILEPSIAE dataset. For both databases, the number of false alarms per hour reached values less than 0.5/h for 92% of the CHB-MIT patients and less than 1.0/h for 80% of the EPILEPSIAE patients. Compared to recent studies, our lightweight approach does not need any estimation of pre-selected features and demonstrates high performances with promising possibilities for the introduction of such automatic methods in the clinical practice.
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spelling pubmed-77329932020-12-15 Automatic seizure detection based on imaged-EEG signals through fully convolutional networks Gómez, Catalina Arbeláez, Pablo Navarrete, Miguel Alvarado-Rojas, Catalina Le Van Quyen, Michel Valderrama, Mario Sci Rep Article Seizure detection is a routine process in epilepsy units requiring manual intervention of well-trained specialists. This process could be extensive, inefficient and time-consuming, especially for long term recordings. We proposed an automatic method to detect epileptic seizures using an imaged-EEG representation of brain signals. To accomplish this, we analyzed EEG signals from two different datasets: the CHB-MIT Scalp EEG database and the EPILEPSIAE project that includes scalp and intracranial recordings. We used fully convolutional neural networks to automatically detect seizures. For our best model, we reached average accuracy and specificity values of 99.3% and 99.6%, respectively, for the CHB-MIT dataset, and corresponding values of 98.0% and 98.3% for the EPILEPSIAE patients. For these patients, the inclusion of intracranial electrodes together with scalp ones increased the average accuracy and specificity values to 99.6% and 58.3%, respectively. Regarding the other metrics, our best model reached average precision of 62.7%, recall of 58.3%, F-measure of 59.0% and AP of 54.5% on the CHB-MIT recordings, and comparatively lowers performances for the EPILEPSIAE dataset. For both databases, the number of false alarms per hour reached values less than 0.5/h for 92% of the CHB-MIT patients and less than 1.0/h for 80% of the EPILEPSIAE patients. Compared to recent studies, our lightweight approach does not need any estimation of pre-selected features and demonstrates high performances with promising possibilities for the introduction of such automatic methods in the clinical practice. Nature Publishing Group UK 2020-12-11 /pmc/articles/PMC7732993/ /pubmed/33311533 http://dx.doi.org/10.1038/s41598-020-78784-3 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Gómez, Catalina
Arbeláez, Pablo
Navarrete, Miguel
Alvarado-Rojas, Catalina
Le Van Quyen, Michel
Valderrama, Mario
Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title_full Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title_fullStr Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title_full_unstemmed Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title_short Automatic seizure detection based on imaged-EEG signals through fully convolutional networks
title_sort automatic seizure detection based on imaged-eeg signals through fully convolutional networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7732993/
https://www.ncbi.nlm.nih.gov/pubmed/33311533
http://dx.doi.org/10.1038/s41598-020-78784-3
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