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Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images

Fetal craniofacial abnormalities are challenging to detect and diagnose on prenatal ultrasound (US). Image segmentation and computer analysis of three-dimensional US volumes of the fetal face may provide an objective measure to quantify fetal facial features and identify abnormalities. We have devel...

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Autores principales: Clark, A. E., Biffi, B., Sivera, R., Dall'Asta, A., Fessey, L., Wong, T.-L., Paramasivam, G., Dunaway, D., Schievano, S., Lees, C. C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7735327/
https://www.ncbi.nlm.nih.gov/pubmed/33391808
http://dx.doi.org/10.1098/rsos.201342
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author Clark, A. E.
Biffi, B.
Sivera, R.
Dall'Asta, A.
Fessey, L.
Wong, T.-L.
Paramasivam, G.
Dunaway, D.
Schievano, S.
Lees, C. C.
author_facet Clark, A. E.
Biffi, B.
Sivera, R.
Dall'Asta, A.
Fessey, L.
Wong, T.-L.
Paramasivam, G.
Dunaway, D.
Schievano, S.
Lees, C. C.
author_sort Clark, A. E.
collection PubMed
description Fetal craniofacial abnormalities are challenging to detect and diagnose on prenatal ultrasound (US). Image segmentation and computer analysis of three-dimensional US volumes of the fetal face may provide an objective measure to quantify fetal facial features and identify abnormalities. We have developed and tested an atlas-based partially automated facial segmentation algorithm; however, the volumes require additional manual segmentation (MS), which is time and labour intensive and may preclude this method from clinical adoption. These manually refined segmentations can then be used as a reference (atlas) by the partially automated segmentation algorithm to improve algorithmic performance with the aim of eliminating the need for manual refinement and developing a fully automated system. This study assesses the inter- and intra-operator variability of MS and tests an optimized version of our automatic segmentation (AS) algorithm. The manual refinements of 15 fetal faces performed by three operators and repeated by one operator were assessed by Dice score, average symmetrical surface distance and volume difference. The performance of the partially automatic algorithm with difference size atlases was evaluated by Dice score and computational time. Assessment of the manual refinements showed low inter- and intra-operator variability demonstrating its suitability for optimizing the AS algorithm. The algorithm showed improved performance following an increase in the atlas size in turn reducing the need for manual refinement.
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spelling pubmed-77353272020-12-31 Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images Clark, A. E. Biffi, B. Sivera, R. Dall'Asta, A. Fessey, L. Wong, T.-L. Paramasivam, G. Dunaway, D. Schievano, S. Lees, C. C. R Soc Open Sci Computer Science and Artificial Intelligence Fetal craniofacial abnormalities are challenging to detect and diagnose on prenatal ultrasound (US). Image segmentation and computer analysis of three-dimensional US volumes of the fetal face may provide an objective measure to quantify fetal facial features and identify abnormalities. We have developed and tested an atlas-based partially automated facial segmentation algorithm; however, the volumes require additional manual segmentation (MS), which is time and labour intensive and may preclude this method from clinical adoption. These manually refined segmentations can then be used as a reference (atlas) by the partially automated segmentation algorithm to improve algorithmic performance with the aim of eliminating the need for manual refinement and developing a fully automated system. This study assesses the inter- and intra-operator variability of MS and tests an optimized version of our automatic segmentation (AS) algorithm. The manual refinements of 15 fetal faces performed by three operators and repeated by one operator were assessed by Dice score, average symmetrical surface distance and volume difference. The performance of the partially automatic algorithm with difference size atlases was evaluated by Dice score and computational time. Assessment of the manual refinements showed low inter- and intra-operator variability demonstrating its suitability for optimizing the AS algorithm. The algorithm showed improved performance following an increase in the atlas size in turn reducing the need for manual refinement. The Royal Society 2020-11-25 /pmc/articles/PMC7735327/ /pubmed/33391808 http://dx.doi.org/10.1098/rsos.201342 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Computer Science and Artificial Intelligence
Clark, A. E.
Biffi, B.
Sivera, R.
Dall'Asta, A.
Fessey, L.
Wong, T.-L.
Paramasivam, G.
Dunaway, D.
Schievano, S.
Lees, C. C.
Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title_full Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title_fullStr Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title_full_unstemmed Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title_short Developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
title_sort developing and testing an algorithm for automatic segmentation of the fetal face from three-dimensional ultrasound images
topic Computer Science and Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7735327/
https://www.ncbi.nlm.nih.gov/pubmed/33391808
http://dx.doi.org/10.1098/rsos.201342
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