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Fully automatic wound segmentation with deep convolutional neural networks

Acute and chronic wounds have varying etiologies and are an economic burden to healthcare systems around the world. The advanced wound care market is expected to exceed $22 billion by 2024. Wound care professionals rely heavily on images and image documentation for proper diagnosis and treatment. Un...

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Autores principales: Wang, Chuanbo, Anisuzzaman, D. M., Williamson, Victor, Dhar, Mrinal Kanti, Rostami, Behrouz, Niezgoda, Jeffrey, Gopalakrishnan, Sandeep, Yu, Zeyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7736585/
https://www.ncbi.nlm.nih.gov/pubmed/33318503
http://dx.doi.org/10.1038/s41598-020-78799-w
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author Wang, Chuanbo
Anisuzzaman, D. M.
Williamson, Victor
Dhar, Mrinal Kanti
Rostami, Behrouz
Niezgoda, Jeffrey
Gopalakrishnan, Sandeep
Yu, Zeyun
author_facet Wang, Chuanbo
Anisuzzaman, D. M.
Williamson, Victor
Dhar, Mrinal Kanti
Rostami, Behrouz
Niezgoda, Jeffrey
Gopalakrishnan, Sandeep
Yu, Zeyun
author_sort Wang, Chuanbo
collection PubMed
description Acute and chronic wounds have varying etiologies and are an economic burden to healthcare systems around the world. The advanced wound care market is expected to exceed $22 billion by 2024. Wound care professionals rely heavily on images and image documentation for proper diagnosis and treatment. Unfortunately lack of expertise can lead to improper diagnosis of wound etiology and inaccurate wound management and documentation. Fully automatic segmentation of wound areas in natural images is an important part of the diagnosis and care protocol since it is crucial to measure the area of the wound and provide quantitative parameters in the treatment. Various deep learning models have gained success in image analysis including semantic segmentation. This manuscript proposes a novel convolutional framework based on MobileNetV2 and connected component labelling to segment wound regions from natural images. The advantage of this model is its lightweight and less compute-intensive architecture. The performance is not compromised and is comparable to deeper neural networks. We build an annotated wound image dataset consisting of 1109 foot ulcer images from 889 patients to train and test the deep learning models. We demonstrate the effectiveness and mobility of our method by conducting comprehensive experiments and analyses on various segmentation neural networks. The full implementation is available at https://github.com/uwm-bigdata/wound-segmentation.
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spelling pubmed-77365852020-12-15 Fully automatic wound segmentation with deep convolutional neural networks Wang, Chuanbo Anisuzzaman, D. M. Williamson, Victor Dhar, Mrinal Kanti Rostami, Behrouz Niezgoda, Jeffrey Gopalakrishnan, Sandeep Yu, Zeyun Sci Rep Article Acute and chronic wounds have varying etiologies and are an economic burden to healthcare systems around the world. The advanced wound care market is expected to exceed $22 billion by 2024. Wound care professionals rely heavily on images and image documentation for proper diagnosis and treatment. Unfortunately lack of expertise can lead to improper diagnosis of wound etiology and inaccurate wound management and documentation. Fully automatic segmentation of wound areas in natural images is an important part of the diagnosis and care protocol since it is crucial to measure the area of the wound and provide quantitative parameters in the treatment. Various deep learning models have gained success in image analysis including semantic segmentation. This manuscript proposes a novel convolutional framework based on MobileNetV2 and connected component labelling to segment wound regions from natural images. The advantage of this model is its lightweight and less compute-intensive architecture. The performance is not compromised and is comparable to deeper neural networks. We build an annotated wound image dataset consisting of 1109 foot ulcer images from 889 patients to train and test the deep learning models. We demonstrate the effectiveness and mobility of our method by conducting comprehensive experiments and analyses on various segmentation neural networks. The full implementation is available at https://github.com/uwm-bigdata/wound-segmentation. Nature Publishing Group UK 2020-12-14 /pmc/articles/PMC7736585/ /pubmed/33318503 http://dx.doi.org/10.1038/s41598-020-78799-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wang, Chuanbo
Anisuzzaman, D. M.
Williamson, Victor
Dhar, Mrinal Kanti
Rostami, Behrouz
Niezgoda, Jeffrey
Gopalakrishnan, Sandeep
Yu, Zeyun
Fully automatic wound segmentation with deep convolutional neural networks
title Fully automatic wound segmentation with deep convolutional neural networks
title_full Fully automatic wound segmentation with deep convolutional neural networks
title_fullStr Fully automatic wound segmentation with deep convolutional neural networks
title_full_unstemmed Fully automatic wound segmentation with deep convolutional neural networks
title_short Fully automatic wound segmentation with deep convolutional neural networks
title_sort fully automatic wound segmentation with deep convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7736585/
https://www.ncbi.nlm.nih.gov/pubmed/33318503
http://dx.doi.org/10.1038/s41598-020-78799-w
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