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Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer

Although serum markers such as carcinoembryonic antigen (CEA) and carbohydrate antigen (CA19-9) have been widely used in screening for pancreatic cancer (PC), their sensitivity and specificity are unsatisfactory. Recently, a novel tool of analyzing serum using the short-time Fourier transform (STFT)...

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Autores principales: Sato, Asahi, Masui, Toshihiko, Yogo, Akitada, Ito, Takashi, Hirakawa, Keiko, Kanawaku, Yoshimasa, Koike, Kaoru, Uemoto, Shinji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7736857/
https://www.ncbi.nlm.nih.gov/pubmed/33318606
http://dx.doi.org/10.1038/s41598-020-79087-3
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author Sato, Asahi
Masui, Toshihiko
Yogo, Akitada
Ito, Takashi
Hirakawa, Keiko
Kanawaku, Yoshimasa
Koike, Kaoru
Uemoto, Shinji
author_facet Sato, Asahi
Masui, Toshihiko
Yogo, Akitada
Ito, Takashi
Hirakawa, Keiko
Kanawaku, Yoshimasa
Koike, Kaoru
Uemoto, Shinji
author_sort Sato, Asahi
collection PubMed
description Although serum markers such as carcinoembryonic antigen (CEA) and carbohydrate antigen (CA19-9) have been widely used in screening for pancreatic cancer (PC), their sensitivity and specificity are unsatisfactory. Recently, a novel tool of analyzing serum using the short-time Fourier transform (STFT) of free induction decays (FIDs) obtained by (1)H-NMR has been introduced. We for the first time evaluated the utility of this technology as a diagnostic tool for PC. Serum was obtained from PC patients before starting any treatments. Samples taken from individuals with benign diseases or donors for liver transplantation were obtained as controls. Serum samples from both groups underwent (1)H-NMR and STFT of FIDs. STFT data were analyzed by partial least squares discriminant analysis (PLS-DA) to clarify whether differences were apparent between groups. As a result, PLS-DA score plots indicated that STFT of FIDs enabled effective classification of groups with and without PC. Additionally, in a subgroup of PC, long-term survivors (≥ 2 years) could be discriminated from short-term survivors (< 2 years), regardless of pathologic stage or CEA or CA19-9 levels. In conclusion, STFT of FIDs obtained from (1)H-NMR have a potential to be a diagnostic and prognostic tool of PC.
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spelling pubmed-77368572020-12-15 Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer Sato, Asahi Masui, Toshihiko Yogo, Akitada Ito, Takashi Hirakawa, Keiko Kanawaku, Yoshimasa Koike, Kaoru Uemoto, Shinji Sci Rep Article Although serum markers such as carcinoembryonic antigen (CEA) and carbohydrate antigen (CA19-9) have been widely used in screening for pancreatic cancer (PC), their sensitivity and specificity are unsatisfactory. Recently, a novel tool of analyzing serum using the short-time Fourier transform (STFT) of free induction decays (FIDs) obtained by (1)H-NMR has been introduced. We for the first time evaluated the utility of this technology as a diagnostic tool for PC. Serum was obtained from PC patients before starting any treatments. Samples taken from individuals with benign diseases or donors for liver transplantation were obtained as controls. Serum samples from both groups underwent (1)H-NMR and STFT of FIDs. STFT data were analyzed by partial least squares discriminant analysis (PLS-DA) to clarify whether differences were apparent between groups. As a result, PLS-DA score plots indicated that STFT of FIDs enabled effective classification of groups with and without PC. Additionally, in a subgroup of PC, long-term survivors (≥ 2 years) could be discriminated from short-term survivors (< 2 years), regardless of pathologic stage or CEA or CA19-9 levels. In conclusion, STFT of FIDs obtained from (1)H-NMR have a potential to be a diagnostic and prognostic tool of PC. Nature Publishing Group UK 2020-12-14 /pmc/articles/PMC7736857/ /pubmed/33318606 http://dx.doi.org/10.1038/s41598-020-79087-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sato, Asahi
Masui, Toshihiko
Yogo, Akitada
Ito, Takashi
Hirakawa, Keiko
Kanawaku, Yoshimasa
Koike, Kaoru
Uemoto, Shinji
Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title_full Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title_fullStr Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title_full_unstemmed Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title_short Time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
title_sort time–frequency analysis of serum with proton nuclear magnetic resonance for diagnosis of pancreatic cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7736857/
https://www.ncbi.nlm.nih.gov/pubmed/33318606
http://dx.doi.org/10.1038/s41598-020-79087-3
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