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Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning

Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with te...

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Autores principales: Khan, Aman Ullah, Melzer, Falk, Hendam, Ashraf, Sayour, Ashraf E., Khan, Iahtasham, Elschner, Mandy C., Younus, Muhammad, Ehtisham-ul-Haque, Syed, Waheed, Usman, Farooq, Muhammad, Ali, Shahzad, Neubauer, Heinrich, El-Adawy, Hosny
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738322/
https://www.ncbi.nlm.nih.gov/pubmed/33344532
http://dx.doi.org/10.3389/fvets.2020.594498
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author Khan, Aman Ullah
Melzer, Falk
Hendam, Ashraf
Sayour, Ashraf E.
Khan, Iahtasham
Elschner, Mandy C.
Younus, Muhammad
Ehtisham-ul-Haque, Syed
Waheed, Usman
Farooq, Muhammad
Ali, Shahzad
Neubauer, Heinrich
El-Adawy, Hosny
author_facet Khan, Aman Ullah
Melzer, Falk
Hendam, Ashraf
Sayour, Ashraf E.
Khan, Iahtasham
Elschner, Mandy C.
Younus, Muhammad
Ehtisham-ul-Haque, Syed
Waheed, Usman
Farooq, Muhammad
Ali, Shahzad
Neubauer, Heinrich
El-Adawy, Hosny
author_sort Khan, Aman Ullah
collection PubMed
description Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with test results. A total of 176 milk and 402 serum samples were collected from cattle and buffaloes in three districts of upper Punjab, Pakistan. Milk samples were investigated using milk ring test (MRT), while sera were tested by Rose–Bengal plate agglutination test (RBPT) and indirect enzyme-linked immunosorbent assay (i-ELISA). Real-time PCR was used for detection of Brucella DNA in investigated samples. Anti-Brucella antibodies were detected in 37 (21.02%) bovine milk samples using MRT and in 66 (16.4%) and 71 (17.7%) bovine sera using RBPT and i-ELISA, respectively. Real-time PCR detected Brucella DNA in 31 (7.71%) from a total of 402 bovine sera and identified as Brucella abortus. Seroprevalence and molecular identification of bovine brucellosis varied in some regions in Pakistan. With the use of machine learning, the association of test results with risk factors including age, animal species/type, herd size, history of abortion, pregnancy status, lactation status, and geographical location was analyzed. Machine learning confirmed a real observation that lactation status was found to be the highest significant factor, while abortion, age, and pregnancy came second in terms of significance. To the authors' best knowledge, this is the first time to use machine learning to assess brucellosis in Pakistan; this is a model that can be applied for other developing countries in the future. The development of control strategies for bovine brucellosis through the implementation of uninterrupted surveillance and interactive extension programs in Pakistan is highly recommended.
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spelling pubmed-77383222020-12-17 Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning Khan, Aman Ullah Melzer, Falk Hendam, Ashraf Sayour, Ashraf E. Khan, Iahtasham Elschner, Mandy C. Younus, Muhammad Ehtisham-ul-Haque, Syed Waheed, Usman Farooq, Muhammad Ali, Shahzad Neubauer, Heinrich El-Adawy, Hosny Front Vet Sci Veterinary Science Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with test results. A total of 176 milk and 402 serum samples were collected from cattle and buffaloes in three districts of upper Punjab, Pakistan. Milk samples were investigated using milk ring test (MRT), while sera were tested by Rose–Bengal plate agglutination test (RBPT) and indirect enzyme-linked immunosorbent assay (i-ELISA). Real-time PCR was used for detection of Brucella DNA in investigated samples. Anti-Brucella antibodies were detected in 37 (21.02%) bovine milk samples using MRT and in 66 (16.4%) and 71 (17.7%) bovine sera using RBPT and i-ELISA, respectively. Real-time PCR detected Brucella DNA in 31 (7.71%) from a total of 402 bovine sera and identified as Brucella abortus. Seroprevalence and molecular identification of bovine brucellosis varied in some regions in Pakistan. With the use of machine learning, the association of test results with risk factors including age, animal species/type, herd size, history of abortion, pregnancy status, lactation status, and geographical location was analyzed. Machine learning confirmed a real observation that lactation status was found to be the highest significant factor, while abortion, age, and pregnancy came second in terms of significance. To the authors' best knowledge, this is the first time to use machine learning to assess brucellosis in Pakistan; this is a model that can be applied for other developing countries in the future. The development of control strategies for bovine brucellosis through the implementation of uninterrupted surveillance and interactive extension programs in Pakistan is highly recommended. Frontiers Media S.A. 2020-12-02 /pmc/articles/PMC7738322/ /pubmed/33344532 http://dx.doi.org/10.3389/fvets.2020.594498 Text en Copyright © 2020 Khan, Melzer, Hendam, Sayour, Khan, Elschner, Younus, Ehtisham-ul-Haque, Waheed, Farooq, Ali, Neubauer and El-Adawy. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Khan, Aman Ullah
Melzer, Falk
Hendam, Ashraf
Sayour, Ashraf E.
Khan, Iahtasham
Elschner, Mandy C.
Younus, Muhammad
Ehtisham-ul-Haque, Syed
Waheed, Usman
Farooq, Muhammad
Ali, Shahzad
Neubauer, Heinrich
El-Adawy, Hosny
Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title_full Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title_fullStr Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title_full_unstemmed Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title_short Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
title_sort seroprevalence and molecular identification of brucella spp. in bovines in pakistan—investigating association with risk factors using machine learning
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738322/
https://www.ncbi.nlm.nih.gov/pubmed/33344532
http://dx.doi.org/10.3389/fvets.2020.594498
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