Cargando…
Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning
Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with te...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738322/ https://www.ncbi.nlm.nih.gov/pubmed/33344532 http://dx.doi.org/10.3389/fvets.2020.594498 |
_version_ | 1783623105607892992 |
---|---|
author | Khan, Aman Ullah Melzer, Falk Hendam, Ashraf Sayour, Ashraf E. Khan, Iahtasham Elschner, Mandy C. Younus, Muhammad Ehtisham-ul-Haque, Syed Waheed, Usman Farooq, Muhammad Ali, Shahzad Neubauer, Heinrich El-Adawy, Hosny |
author_facet | Khan, Aman Ullah Melzer, Falk Hendam, Ashraf Sayour, Ashraf E. Khan, Iahtasham Elschner, Mandy C. Younus, Muhammad Ehtisham-ul-Haque, Syed Waheed, Usman Farooq, Muhammad Ali, Shahzad Neubauer, Heinrich El-Adawy, Hosny |
author_sort | Khan, Aman Ullah |
collection | PubMed |
description | Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with test results. A total of 176 milk and 402 serum samples were collected from cattle and buffaloes in three districts of upper Punjab, Pakistan. Milk samples were investigated using milk ring test (MRT), while sera were tested by Rose–Bengal plate agglutination test (RBPT) and indirect enzyme-linked immunosorbent assay (i-ELISA). Real-time PCR was used for detection of Brucella DNA in investigated samples. Anti-Brucella antibodies were detected in 37 (21.02%) bovine milk samples using MRT and in 66 (16.4%) and 71 (17.7%) bovine sera using RBPT and i-ELISA, respectively. Real-time PCR detected Brucella DNA in 31 (7.71%) from a total of 402 bovine sera and identified as Brucella abortus. Seroprevalence and molecular identification of bovine brucellosis varied in some regions in Pakistan. With the use of machine learning, the association of test results with risk factors including age, animal species/type, herd size, history of abortion, pregnancy status, lactation status, and geographical location was analyzed. Machine learning confirmed a real observation that lactation status was found to be the highest significant factor, while abortion, age, and pregnancy came second in terms of significance. To the authors' best knowledge, this is the first time to use machine learning to assess brucellosis in Pakistan; this is a model that can be applied for other developing countries in the future. The development of control strategies for bovine brucellosis through the implementation of uninterrupted surveillance and interactive extension programs in Pakistan is highly recommended. |
format | Online Article Text |
id | pubmed-7738322 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-77383222020-12-17 Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning Khan, Aman Ullah Melzer, Falk Hendam, Ashraf Sayour, Ashraf E. Khan, Iahtasham Elschner, Mandy C. Younus, Muhammad Ehtisham-ul-Haque, Syed Waheed, Usman Farooq, Muhammad Ali, Shahzad Neubauer, Heinrich El-Adawy, Hosny Front Vet Sci Veterinary Science Bovine brucellosis is a global zoonosis of public health importance. It is an endemic disease in many developing countries including Pakistan. This study aimed to estimate the seroprevalence and molecular detection of bovine brucellosis and to assess the association of potential risk factors with test results. A total of 176 milk and 402 serum samples were collected from cattle and buffaloes in three districts of upper Punjab, Pakistan. Milk samples were investigated using milk ring test (MRT), while sera were tested by Rose–Bengal plate agglutination test (RBPT) and indirect enzyme-linked immunosorbent assay (i-ELISA). Real-time PCR was used for detection of Brucella DNA in investigated samples. Anti-Brucella antibodies were detected in 37 (21.02%) bovine milk samples using MRT and in 66 (16.4%) and 71 (17.7%) bovine sera using RBPT and i-ELISA, respectively. Real-time PCR detected Brucella DNA in 31 (7.71%) from a total of 402 bovine sera and identified as Brucella abortus. Seroprevalence and molecular identification of bovine brucellosis varied in some regions in Pakistan. With the use of machine learning, the association of test results with risk factors including age, animal species/type, herd size, history of abortion, pregnancy status, lactation status, and geographical location was analyzed. Machine learning confirmed a real observation that lactation status was found to be the highest significant factor, while abortion, age, and pregnancy came second in terms of significance. To the authors' best knowledge, this is the first time to use machine learning to assess brucellosis in Pakistan; this is a model that can be applied for other developing countries in the future. The development of control strategies for bovine brucellosis through the implementation of uninterrupted surveillance and interactive extension programs in Pakistan is highly recommended. Frontiers Media S.A. 2020-12-02 /pmc/articles/PMC7738322/ /pubmed/33344532 http://dx.doi.org/10.3389/fvets.2020.594498 Text en Copyright © 2020 Khan, Melzer, Hendam, Sayour, Khan, Elschner, Younus, Ehtisham-ul-Haque, Waheed, Farooq, Ali, Neubauer and El-Adawy. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Khan, Aman Ullah Melzer, Falk Hendam, Ashraf Sayour, Ashraf E. Khan, Iahtasham Elschner, Mandy C. Younus, Muhammad Ehtisham-ul-Haque, Syed Waheed, Usman Farooq, Muhammad Ali, Shahzad Neubauer, Heinrich El-Adawy, Hosny Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title | Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title_full | Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title_fullStr | Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title_full_unstemmed | Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title_short | Seroprevalence and Molecular Identification of Brucella spp. in Bovines in Pakistan—Investigating Association With Risk Factors Using Machine Learning |
title_sort | seroprevalence and molecular identification of brucella spp. in bovines in pakistan—investigating association with risk factors using machine learning |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738322/ https://www.ncbi.nlm.nih.gov/pubmed/33344532 http://dx.doi.org/10.3389/fvets.2020.594498 |
work_keys_str_mv | AT khanamanullah seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT melzerfalk seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT hendamashraf seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT sayourashrafe seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT khaniahtasham seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT elschnermandyc seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT younusmuhammad seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT ehtishamulhaquesyed seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT waheedusman seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT farooqmuhammad seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT alishahzad seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT neubauerheinrich seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning AT eladawyhosny seroprevalenceandmolecularidentificationofbrucellasppinbovinesinpakistaninvestigatingassociationwithriskfactorsusingmachinelearning |