Cargando…

Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients

Recurrence is a major problem for prostate cancer patients, thus, identifying prognosis-related markers to evaluate clinical outcomes is essential. Here, we established a fifteen-miRNA-based recurrence-free survival (RFS) predicting signature based on the miRNA expression profile extracted from The...

Descripción completa

Detalles Bibliográficos
Autores principales: Bian, Zichen, Huang, Xinbo, Chen, Yiding, Meng, Jialin, Feng, Xingliang, Zhang, Meng, Zhang, Li, Zhou, Jun, Liang, Chaozhao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738977/
https://www.ncbi.nlm.nih.gov/pubmed/33390797
http://dx.doi.org/10.7150/ijms.49412
_version_ 1783623234938208256
author Bian, Zichen
Huang, Xinbo
Chen, Yiding
Meng, Jialin
Feng, Xingliang
Zhang, Meng
Zhang, Li
Zhou, Jun
Liang, Chaozhao
author_facet Bian, Zichen
Huang, Xinbo
Chen, Yiding
Meng, Jialin
Feng, Xingliang
Zhang, Meng
Zhang, Li
Zhou, Jun
Liang, Chaozhao
author_sort Bian, Zichen
collection PubMed
description Recurrence is a major problem for prostate cancer patients, thus, identifying prognosis-related markers to evaluate clinical outcomes is essential. Here, we established a fifteen-miRNA-based recurrence-free survival (RFS) predicting signature based on the miRNA expression profile extracted from The Cancer Genome Atlas (TCGA) database by the LASSO Cox regression analysis. The median risk score generated by the signature in both the TCGA training and the external Memorial Sloan-Kettering Cancer Center (MSKCC) validation cohorts was employed and the patients were subclassified into low- and high-risk subgroups. The Kaplan-Meier plot and log-rank analyses showed significant survival differences between low- and high-risk subgroups of patients (TCGA, log-rank P < 0.001 & MSKCC, log-rank P = 0.045). In addition, the receiver operating characteristic curves of both the training and external validation cohorts indicated the good performance of our model. After predicting the downstream genes of these miRNAs, the miRNA-mRNA network was visualized by Cytoscape software. In addition, pathway analyses found that the differences between two groups were mainly enriched on tumor progression and drug resistance-related pathways. Multivariate analyses revealed that the miRNA signature is an independent indicator of RFS prognosis for prostate cancer patients with or without clinicopathological features. In summary, our novel fifteen-miRNA-based prediction signature is a reliable method to evaluate the prognosis of prostate cancer patients.
format Online
Article
Text
id pubmed-7738977
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Ivyspring International Publisher
record_format MEDLINE/PubMed
spelling pubmed-77389772021-01-01 Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients Bian, Zichen Huang, Xinbo Chen, Yiding Meng, Jialin Feng, Xingliang Zhang, Meng Zhang, Li Zhou, Jun Liang, Chaozhao Int J Med Sci Research Paper Recurrence is a major problem for prostate cancer patients, thus, identifying prognosis-related markers to evaluate clinical outcomes is essential. Here, we established a fifteen-miRNA-based recurrence-free survival (RFS) predicting signature based on the miRNA expression profile extracted from The Cancer Genome Atlas (TCGA) database by the LASSO Cox regression analysis. The median risk score generated by the signature in both the TCGA training and the external Memorial Sloan-Kettering Cancer Center (MSKCC) validation cohorts was employed and the patients were subclassified into low- and high-risk subgroups. The Kaplan-Meier plot and log-rank analyses showed significant survival differences between low- and high-risk subgroups of patients (TCGA, log-rank P < 0.001 & MSKCC, log-rank P = 0.045). In addition, the receiver operating characteristic curves of both the training and external validation cohorts indicated the good performance of our model. After predicting the downstream genes of these miRNAs, the miRNA-mRNA network was visualized by Cytoscape software. In addition, pathway analyses found that the differences between two groups were mainly enriched on tumor progression and drug resistance-related pathways. Multivariate analyses revealed that the miRNA signature is an independent indicator of RFS prognosis for prostate cancer patients with or without clinicopathological features. In summary, our novel fifteen-miRNA-based prediction signature is a reliable method to evaluate the prognosis of prostate cancer patients. Ivyspring International Publisher 2021-01-01 /pmc/articles/PMC7738977/ /pubmed/33390797 http://dx.doi.org/10.7150/ijms.49412 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Bian, Zichen
Huang, Xinbo
Chen, Yiding
Meng, Jialin
Feng, Xingliang
Zhang, Meng
Zhang, Li
Zhou, Jun
Liang, Chaozhao
Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title_full Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title_fullStr Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title_full_unstemmed Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title_short Fifteen-MiRNA-Based Signature Is a Reliable Prognosis-Predicting Tool for Prostate Cancer Patients
title_sort fifteen-mirna-based signature is a reliable prognosis-predicting tool for prostate cancer patients
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7738977/
https://www.ncbi.nlm.nih.gov/pubmed/33390797
http://dx.doi.org/10.7150/ijms.49412
work_keys_str_mv AT bianzichen fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT huangxinbo fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT chenyiding fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT mengjialin fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT fengxingliang fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT zhangmeng fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT zhangli fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT zhoujun fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients
AT liangchaozhao fifteenmirnabasedsignatureisareliableprognosispredictingtoolforprostatecancerpatients