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Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model
We have built a computational model of individual aging trajectories of health and survival, containing physical, functional, and biological variables, conditioned on demographic, lifestyle, and medical background information. We combine techniques of modern machine learning with a network approach,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7741334/ http://dx.doi.org/10.1093/geroni/igaa057.3387 |
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author | Farrell, Spencer Mitnitski, Arnold Rockwood, Kenneth Rutenberg, Andrew |
author_facet | Farrell, Spencer Mitnitski, Arnold Rockwood, Kenneth Rutenberg, Andrew |
author_sort | Farrell, Spencer |
collection | PubMed |
description | We have built a computational model of individual aging trajectories of health and survival, containing physical, functional, and biological variables, conditioned on demographic, lifestyle, and medical background information. We combine techniques of modern machine learning with a network approach, where the health variables are coupled by an interaction network within a stochastic dynamical system. The resulting model is scalable to large longitudinal data sets, is predictive of individual high-dimensional health trajectories and survival, and infers an interpretable network of interactions between the health variables. The interaction network gives us the ability to identify which interactions between variables are used by the model, demonstrating that realistic physiological connections are inferred. We use English Longitudinal Study of Aging (ELSA) data to train our model and show that it performs better than standard linear models for health outcomes and survival, while also revealing the relevant interactions. Our model can be used to generate synthetic individuals that age realistically from input data at baseline, as well as the ability to probe future aging outcomes given an arbitrary initial health state. |
format | Online Article Text |
id | pubmed-7741334 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77413342020-12-21 Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model Farrell, Spencer Mitnitski, Arnold Rockwood, Kenneth Rutenberg, Andrew Innov Aging Abstracts We have built a computational model of individual aging trajectories of health and survival, containing physical, functional, and biological variables, conditioned on demographic, lifestyle, and medical background information. We combine techniques of modern machine learning with a network approach, where the health variables are coupled by an interaction network within a stochastic dynamical system. The resulting model is scalable to large longitudinal data sets, is predictive of individual high-dimensional health trajectories and survival, and infers an interpretable network of interactions between the health variables. The interaction network gives us the ability to identify which interactions between variables are used by the model, demonstrating that realistic physiological connections are inferred. We use English Longitudinal Study of Aging (ELSA) data to train our model and show that it performs better than standard linear models for health outcomes and survival, while also revealing the relevant interactions. Our model can be used to generate synthetic individuals that age realistically from input data at baseline, as well as the ability to probe future aging outcomes given an arbitrary initial health state. Oxford University Press 2020-12-16 /pmc/articles/PMC7741334/ http://dx.doi.org/10.1093/geroni/igaa057.3387 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of The Gerontological Society of America. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Abstracts Farrell, Spencer Mitnitski, Arnold Rockwood, Kenneth Rutenberg, Andrew Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title | Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title_full | Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title_fullStr | Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title_full_unstemmed | Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title_short | Forecasting Individual Aging Trajectories and Survival with an Interpretable Network Model |
title_sort | forecasting individual aging trajectories and survival with an interpretable network model |
topic | Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7741334/ http://dx.doi.org/10.1093/geroni/igaa057.3387 |
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