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Virus detection using nanoparticles and deep neural network–enabled smartphone system
Emerging and reemerging infections present an ever-increasing challenge to global health. Here, we report a nanoparticle-enabled smartphone (NES) system for rapid and sensitive virus detection. The virus is captured on a microchip and labeled with specifically designed platinum nanoprobes to induce...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Association for the Advancement of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7744080/ https://www.ncbi.nlm.nih.gov/pubmed/33328239 http://dx.doi.org/10.1126/sciadv.abd5354 |
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author | Draz, Mohamed S. Vasan, Anish Muthupandian, Aradana Kanakasabapathy, Manoj Kumar Thirumalaraju, Prudhvi Sreeram, Aparna Krishnakumar, Sanchana Yogesh, Vinish Lin, Wenyu Yu, Xu G. Chung, Raymond T. Shafiee, Hadi |
author_facet | Draz, Mohamed S. Vasan, Anish Muthupandian, Aradana Kanakasabapathy, Manoj Kumar Thirumalaraju, Prudhvi Sreeram, Aparna Krishnakumar, Sanchana Yogesh, Vinish Lin, Wenyu Yu, Xu G. Chung, Raymond T. Shafiee, Hadi |
author_sort | Draz, Mohamed S. |
collection | PubMed |
description | Emerging and reemerging infections present an ever-increasing challenge to global health. Here, we report a nanoparticle-enabled smartphone (NES) system for rapid and sensitive virus detection. The virus is captured on a microchip and labeled with specifically designed platinum nanoprobes to induce gas bubble formation in the presence of hydrogen peroxide. The formed bubbles are controlled to make distinct visual patterns, allowing simple and sensitive virus detection using a convolutional neural network (CNN)–enabled smartphone system and without using any optical hardware smartphone attachment. We evaluated the developed CNN-NES for testing viruses such as hepatitis B virus (HBV), HCV, and Zika virus (ZIKV). The CNN-NES was tested with 134 ZIKV- and HBV-spiked and ZIKV- and HCV-infected patient plasma/serum samples. The sensitivity of the system in qualitatively detecting viral-infected samples with a clinically relevant virus concentration threshold of 250 copies/ml was 98.97% with a confidence interval of 94.39 to 99.97%. |
format | Online Article Text |
id | pubmed-7744080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-77440802021-01-04 Virus detection using nanoparticles and deep neural network–enabled smartphone system Draz, Mohamed S. Vasan, Anish Muthupandian, Aradana Kanakasabapathy, Manoj Kumar Thirumalaraju, Prudhvi Sreeram, Aparna Krishnakumar, Sanchana Yogesh, Vinish Lin, Wenyu Yu, Xu G. Chung, Raymond T. Shafiee, Hadi Sci Adv Research Articles Emerging and reemerging infections present an ever-increasing challenge to global health. Here, we report a nanoparticle-enabled smartphone (NES) system for rapid and sensitive virus detection. The virus is captured on a microchip and labeled with specifically designed platinum nanoprobes to induce gas bubble formation in the presence of hydrogen peroxide. The formed bubbles are controlled to make distinct visual patterns, allowing simple and sensitive virus detection using a convolutional neural network (CNN)–enabled smartphone system and without using any optical hardware smartphone attachment. We evaluated the developed CNN-NES for testing viruses such as hepatitis B virus (HBV), HCV, and Zika virus (ZIKV). The CNN-NES was tested with 134 ZIKV- and HBV-spiked and ZIKV- and HCV-infected patient plasma/serum samples. The sensitivity of the system in qualitatively detecting viral-infected samples with a clinically relevant virus concentration threshold of 250 copies/ml was 98.97% with a confidence interval of 94.39 to 99.97%. American Association for the Advancement of Science 2020-12-16 /pmc/articles/PMC7744080/ /pubmed/33328239 http://dx.doi.org/10.1126/sciadv.abd5354 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/ https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited. |
spellingShingle | Research Articles Draz, Mohamed S. Vasan, Anish Muthupandian, Aradana Kanakasabapathy, Manoj Kumar Thirumalaraju, Prudhvi Sreeram, Aparna Krishnakumar, Sanchana Yogesh, Vinish Lin, Wenyu Yu, Xu G. Chung, Raymond T. Shafiee, Hadi Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title | Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title_full | Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title_fullStr | Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title_full_unstemmed | Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title_short | Virus detection using nanoparticles and deep neural network–enabled smartphone system |
title_sort | virus detection using nanoparticles and deep neural network–enabled smartphone system |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7744080/ https://www.ncbi.nlm.nih.gov/pubmed/33328239 http://dx.doi.org/10.1126/sciadv.abd5354 |
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