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Sample-Specific Prediction Error Measures in Spectroscopy

In applied spectroscopy, the purpose of multivariate calibration is almost exclusively to relate analyte concentrations and spectroscopic measurements. The multivariate calibration model provides estimates of analyte concentrations based on the spectroscopic measurements. Predictive performance is o...

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Detalles Bibliográficos
Autores principales: Emil Eskildsen, Carl, Næs, Tormod
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7745614/
https://www.ncbi.nlm.nih.gov/pubmed/32116011
http://dx.doi.org/10.1177/0003702820913562
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author Emil Eskildsen, Carl
Næs, Tormod
author_facet Emil Eskildsen, Carl
Næs, Tormod
author_sort Emil Eskildsen, Carl
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description In applied spectroscopy, the purpose of multivariate calibration is almost exclusively to relate analyte concentrations and spectroscopic measurements. The multivariate calibration model provides estimates of analyte concentrations based on the spectroscopic measurements. Predictive performance is often evaluated based on a mean squared error. While this average measure can be used in model selection, it is not satisfactory for evaluating the uncertainty of individual predictions. For a calibration, the uncertainties are sample specific. This is especially true for multivariate calibration, where interfering compounds may be present. Consider in-line spectroscopic measurements during a chemical reaction, production, etc. Here, reference values are not necessarily available. Hence, one should know the uncertainty of a given prediction in order to use that prediction for telling the state of the chemical reaction, adjusting the process, etc. In this paper, we discuss the influence of variance and bias on sample-specific prediction errors in multivariate calibration. We compare theoretical formulae with results obtained on experimental data. The results point towards the fact that bias contribution cannot necessarily be neglected when assessing sample-specific prediction ability in practice.
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spelling pubmed-77456142021-01-08 Sample-Specific Prediction Error Measures in Spectroscopy Emil Eskildsen, Carl Næs, Tormod Appl Spectrosc Articles In applied spectroscopy, the purpose of multivariate calibration is almost exclusively to relate analyte concentrations and spectroscopic measurements. The multivariate calibration model provides estimates of analyte concentrations based on the spectroscopic measurements. Predictive performance is often evaluated based on a mean squared error. While this average measure can be used in model selection, it is not satisfactory for evaluating the uncertainty of individual predictions. For a calibration, the uncertainties are sample specific. This is especially true for multivariate calibration, where interfering compounds may be present. Consider in-line spectroscopic measurements during a chemical reaction, production, etc. Here, reference values are not necessarily available. Hence, one should know the uncertainty of a given prediction in order to use that prediction for telling the state of the chemical reaction, adjusting the process, etc. In this paper, we discuss the influence of variance and bias on sample-specific prediction errors in multivariate calibration. We compare theoretical formulae with results obtained on experimental data. The results point towards the fact that bias contribution cannot necessarily be neglected when assessing sample-specific prediction ability in practice. SAGE Publications 2020-05-26 2020-07 /pmc/articles/PMC7745614/ /pubmed/32116011 http://dx.doi.org/10.1177/0003702820913562 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Articles
Emil Eskildsen, Carl
Næs, Tormod
Sample-Specific Prediction Error Measures in Spectroscopy
title Sample-Specific Prediction Error Measures in Spectroscopy
title_full Sample-Specific Prediction Error Measures in Spectroscopy
title_fullStr Sample-Specific Prediction Error Measures in Spectroscopy
title_full_unstemmed Sample-Specific Prediction Error Measures in Spectroscopy
title_short Sample-Specific Prediction Error Measures in Spectroscopy
title_sort sample-specific prediction error measures in spectroscopy
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7745614/
https://www.ncbi.nlm.nih.gov/pubmed/32116011
http://dx.doi.org/10.1177/0003702820913562
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