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Development platform for artificial pancreas algorithms
BACKGROUND AND AIMS: Assessing algorithms of artificial pancreas systems is critical in developing automated and fault-tolerant solutions that work outside clinical settings. The development and evaluation of algorithms can be facilitated with a platform that conducts virtual clinical trials. We pre...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7746189/ https://www.ncbi.nlm.nih.gov/pubmed/33332411 http://dx.doi.org/10.1371/journal.pone.0243139 |
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author | Smaoui, Mohamed Raef Rabasa-Lhoret, Remi Haidar, Ahmad |
author_facet | Smaoui, Mohamed Raef Rabasa-Lhoret, Remi Haidar, Ahmad |
author_sort | Smaoui, Mohamed Raef |
collection | PubMed |
description | BACKGROUND AND AIMS: Assessing algorithms of artificial pancreas systems is critical in developing automated and fault-tolerant solutions that work outside clinical settings. The development and evaluation of algorithms can be facilitated with a platform that conducts virtual clinical trials. We present in this paper a clinically validated cloud-based distributed platform that supports the development and comprehensive testing of single and dual-hormone algorithms for type 1 diabetes mellitus (T1DM). METHODS: The platform is built on principles of object-oriented design and runs user algorithms in real-time virtual clinical trials utilizing a multi-threaded environment enabled by concurrent execution over a cloud infrastructure. The platform architecture isolates user algorithms located on personal machines from proprietary patient data running on the cloud. Users import a plugin into their algorithms (Matlab, Python, or Java) to connect to the platform. Once connected, users interact with a graphical interface to design experimental protocols for their trials. Protocols include trial duration in days, mealtimes and amounts, variability in mealtimes and amounts, carbohydrate counting errors, snacks, and onboard insulin levels. RESULTS: The platform facilitates development by solving the ODE model in the cloud on large CPU-optimized machines, providing a 62% improvement in memory, speed and CPU utilization. Users can easily debug & modify code, test multiple strategies, and generate detailed clinical performance reports. We validated and integrated into the platform a glucoregulatory system of ordinary differential equations (ODEs) parameterized with clinical data to mimic the inter and intra-day variability of glucose responses of 15 T1DM patients. CONCLUSION: The platform utilizes the validated patient model to conduct virtual clinical trials for the rapid development and testing of closed-loop algorithms for T1DM. |
format | Online Article Text |
id | pubmed-7746189 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-77461892020-12-31 Development platform for artificial pancreas algorithms Smaoui, Mohamed Raef Rabasa-Lhoret, Remi Haidar, Ahmad PLoS One Research Article BACKGROUND AND AIMS: Assessing algorithms of artificial pancreas systems is critical in developing automated and fault-tolerant solutions that work outside clinical settings. The development and evaluation of algorithms can be facilitated with a platform that conducts virtual clinical trials. We present in this paper a clinically validated cloud-based distributed platform that supports the development and comprehensive testing of single and dual-hormone algorithms for type 1 diabetes mellitus (T1DM). METHODS: The platform is built on principles of object-oriented design and runs user algorithms in real-time virtual clinical trials utilizing a multi-threaded environment enabled by concurrent execution over a cloud infrastructure. The platform architecture isolates user algorithms located on personal machines from proprietary patient data running on the cloud. Users import a plugin into their algorithms (Matlab, Python, or Java) to connect to the platform. Once connected, users interact with a graphical interface to design experimental protocols for their trials. Protocols include trial duration in days, mealtimes and amounts, variability in mealtimes and amounts, carbohydrate counting errors, snacks, and onboard insulin levels. RESULTS: The platform facilitates development by solving the ODE model in the cloud on large CPU-optimized machines, providing a 62% improvement in memory, speed and CPU utilization. Users can easily debug & modify code, test multiple strategies, and generate detailed clinical performance reports. We validated and integrated into the platform a glucoregulatory system of ordinary differential equations (ODEs) parameterized with clinical data to mimic the inter and intra-day variability of glucose responses of 15 T1DM patients. CONCLUSION: The platform utilizes the validated patient model to conduct virtual clinical trials for the rapid development and testing of closed-loop algorithms for T1DM. Public Library of Science 2020-12-17 /pmc/articles/PMC7746189/ /pubmed/33332411 http://dx.doi.org/10.1371/journal.pone.0243139 Text en © 2020 Smaoui et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Smaoui, Mohamed Raef Rabasa-Lhoret, Remi Haidar, Ahmad Development platform for artificial pancreas algorithms |
title | Development platform for artificial pancreas algorithms |
title_full | Development platform for artificial pancreas algorithms |
title_fullStr | Development platform for artificial pancreas algorithms |
title_full_unstemmed | Development platform for artificial pancreas algorithms |
title_short | Development platform for artificial pancreas algorithms |
title_sort | development platform for artificial pancreas algorithms |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7746189/ https://www.ncbi.nlm.nih.gov/pubmed/33332411 http://dx.doi.org/10.1371/journal.pone.0243139 |
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