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MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle

MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype dat...

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Detalles Bibliográficos
Autores principales: Asplund, Olof, Rung, Johan, Groop, Leif, Prasad B, Rashmi, Hansson, Ola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7747357/
https://www.ncbi.nlm.nih.gov/pubmed/33338203
http://dx.doi.org/10.1093/database/baaa111
Descripción
Sumario:MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype data, with information such as age, sex, BMI and disease status, are combined with skeletal muscle gene expression to provide insights into gene function in skeletal muscle. It aims to facilitate easy exploration of the data using powerful data visualization functions, while allowing for sample selection, in-depth inspection and further analysis using external tools. AVAILABILITY: MuscleAtlasExplorer is available at https://mae.crc.med.lu.se/mae2.