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MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle
MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype dat...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7747357/ https://www.ncbi.nlm.nih.gov/pubmed/33338203 http://dx.doi.org/10.1093/database/baaa111 |
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author | Asplund, Olof Rung, Johan Groop, Leif Prasad B, Rashmi Hansson, Ola |
author_facet | Asplund, Olof Rung, Johan Groop, Leif Prasad B, Rashmi Hansson, Ola |
author_sort | Asplund, Olof |
collection | PubMed |
description | MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype data, with information such as age, sex, BMI and disease status, are combined with skeletal muscle gene expression to provide insights into gene function in skeletal muscle. It aims to facilitate easy exploration of the data using powerful data visualization functions, while allowing for sample selection, in-depth inspection and further analysis using external tools. AVAILABILITY: MuscleAtlasExplorer is available at https://mae.crc.med.lu.se/mae2. |
format | Online Article Text |
id | pubmed-7747357 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77473572020-12-22 MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle Asplund, Olof Rung, Johan Groop, Leif Prasad B, Rashmi Hansson, Ola Database (Oxford) Database Tool MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype data, with information such as age, sex, BMI and disease status, are combined with skeletal muscle gene expression to provide insights into gene function in skeletal muscle. It aims to facilitate easy exploration of the data using powerful data visualization functions, while allowing for sample selection, in-depth inspection and further analysis using external tools. AVAILABILITY: MuscleAtlasExplorer is available at https://mae.crc.med.lu.se/mae2. Oxford University Press 2020-12-18 /pmc/articles/PMC7747357/ /pubmed/33338203 http://dx.doi.org/10.1093/database/baaa111 Text en © The Author(s) 2021. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Tool Asplund, Olof Rung, Johan Groop, Leif Prasad B, Rashmi Hansson, Ola MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title | MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title_full | MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title_fullStr | MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title_full_unstemmed | MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title_short | MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle |
title_sort | muscleatlasexplorer: a web service for studying gene expression in human skeletal muscle |
topic | Database Tool |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7747357/ https://www.ncbi.nlm.nih.gov/pubmed/33338203 http://dx.doi.org/10.1093/database/baaa111 |
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