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Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases

Class I terpene synthase (TPS) generates bioactive terpenoids with diverse backbones. Sesterterpene synthase (sester-TPS, C25), a branch of class I TPSs, was recently identified in Brassicaceae. However, the catalytic mechanisms of sester-TPSs are not fully understood. Here, we first identified thre...

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Autores principales: Chen, Qingwen, Li, Jianxu, Liu, Zhixi, Mitsuhashi, Takaaki, Zhang, Yuting, Liu, Haili, Ma, Yihua, He, Juan, Shinada, Tetsuro, Sato, Tsutomu, Wang, Yong, Liu, Hongwei, Abe, Ikuro, Zhang, Peng, Wang, Guodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7747971/
https://www.ncbi.nlm.nih.gov/pubmed/33367256
http://dx.doi.org/10.1016/j.xplc.2020.100051
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author Chen, Qingwen
Li, Jianxu
Liu, Zhixi
Mitsuhashi, Takaaki
Zhang, Yuting
Liu, Haili
Ma, Yihua
He, Juan
Shinada, Tetsuro
Sato, Tsutomu
Wang, Yong
Liu, Hongwei
Abe, Ikuro
Zhang, Peng
Wang, Guodong
author_facet Chen, Qingwen
Li, Jianxu
Liu, Zhixi
Mitsuhashi, Takaaki
Zhang, Yuting
Liu, Haili
Ma, Yihua
He, Juan
Shinada, Tetsuro
Sato, Tsutomu
Wang, Yong
Liu, Hongwei
Abe, Ikuro
Zhang, Peng
Wang, Guodong
author_sort Chen, Qingwen
collection PubMed
description Class I terpene synthase (TPS) generates bioactive terpenoids with diverse backbones. Sesterterpene synthase (sester-TPS, C25), a branch of class I TPSs, was recently identified in Brassicaceae. However, the catalytic mechanisms of sester-TPSs are not fully understood. Here, we first identified three nonclustered functional sester-TPSs (AtTPS06, AtTPS22, and AtTPS29) in Arabidopsis thaliana. AtTPS06 utilizes a type-B cyclization mechanism, whereas most other sester-TPSs produce various sesterterpene backbones via a type-A cyclization mechanism. We then determined the crystal structure of the AtTPS18–FSPP complex to explore the cyclization mechanism of plant sester-TPSs. We used structural comparisons and site-directed mutagenesis to further elucidate the mechanism: (1) mainly due to the outward shift of helix G, plant sester-TPSs have a larger catalytic pocket than do mono-, sesqui-, and di-TPSs to accommodate GFPP; (2) type-A sester-TPSs have more aromatic residues (five or six) in their catalytic pocket than classic TPSs (two or three), which also determines whether the type-A or type-B cyclization mechanism is active; and (3) the other residues responsible for product fidelity are determined by interconversion of AtTPS18 and its close homologs. Altogether, this study improves our understanding of the catalytic mechanism of plant sester-TPS, which ultimately enables the rational engineering of sesterterpenoids for future applications.
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spelling pubmed-77479712020-12-22 Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases Chen, Qingwen Li, Jianxu Liu, Zhixi Mitsuhashi, Takaaki Zhang, Yuting Liu, Haili Ma, Yihua He, Juan Shinada, Tetsuro Sato, Tsutomu Wang, Yong Liu, Hongwei Abe, Ikuro Zhang, Peng Wang, Guodong Plant Commun Research Article Class I terpene synthase (TPS) generates bioactive terpenoids with diverse backbones. Sesterterpene synthase (sester-TPS, C25), a branch of class I TPSs, was recently identified in Brassicaceae. However, the catalytic mechanisms of sester-TPSs are not fully understood. Here, we first identified three nonclustered functional sester-TPSs (AtTPS06, AtTPS22, and AtTPS29) in Arabidopsis thaliana. AtTPS06 utilizes a type-B cyclization mechanism, whereas most other sester-TPSs produce various sesterterpene backbones via a type-A cyclization mechanism. We then determined the crystal structure of the AtTPS18–FSPP complex to explore the cyclization mechanism of plant sester-TPSs. We used structural comparisons and site-directed mutagenesis to further elucidate the mechanism: (1) mainly due to the outward shift of helix G, plant sester-TPSs have a larger catalytic pocket than do mono-, sesqui-, and di-TPSs to accommodate GFPP; (2) type-A sester-TPSs have more aromatic residues (five or six) in their catalytic pocket than classic TPSs (two or three), which also determines whether the type-A or type-B cyclization mechanism is active; and (3) the other residues responsible for product fidelity are determined by interconversion of AtTPS18 and its close homologs. Altogether, this study improves our understanding of the catalytic mechanism of plant sester-TPS, which ultimately enables the rational engineering of sesterterpenoids for future applications. Elsevier 2020-04-29 /pmc/articles/PMC7747971/ /pubmed/33367256 http://dx.doi.org/10.1016/j.xplc.2020.100051 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Chen, Qingwen
Li, Jianxu
Liu, Zhixi
Mitsuhashi, Takaaki
Zhang, Yuting
Liu, Haili
Ma, Yihua
He, Juan
Shinada, Tetsuro
Sato, Tsutomu
Wang, Yong
Liu, Hongwei
Abe, Ikuro
Zhang, Peng
Wang, Guodong
Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title_full Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title_fullStr Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title_full_unstemmed Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title_short Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases
title_sort molecular basis for sesterterpene diversity produced by plant terpene synthases
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7747971/
https://www.ncbi.nlm.nih.gov/pubmed/33367256
http://dx.doi.org/10.1016/j.xplc.2020.100051
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