The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)

Quercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of...

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Autores principales: Xie, Chunping, Liu, Dawei, Nan, Chenghui, Fang, Yanming, Huang, Fulong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748451/
https://www.ncbi.nlm.nih.gov/pubmed/33366805
http://dx.doi.org/10.1080/23802359.2020.1718029
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author Xie, Chunping
Liu, Dawei
Nan, Chenghui
Fang, Yanming
Huang, Fulong
author_facet Xie, Chunping
Liu, Dawei
Nan, Chenghui
Fang, Yanming
Huang, Fulong
author_sort Xie, Chunping
collection PubMed
description Quercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of a large single-copy region (90,617 bp), small single-copy region (19,035 bp), and two short inverted repeat regions (25,866 bp). We found that the cp genome encodes for 131 genes, including 85 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. The results of the phylogenetic analysis of the complete cp genome sequence illustrated that Q. phillyraeoides is a member of the section Quercus and it is most closely related to Q. tarokoensis.
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spelling pubmed-77484512020-12-22 The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) Xie, Chunping Liu, Dawei Nan, Chenghui Fang, Yanming Huang, Fulong Mitochondrial DNA B Resour Mitogenome Announcement Quercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of a large single-copy region (90,617 bp), small single-copy region (19,035 bp), and two short inverted repeat regions (25,866 bp). We found that the cp genome encodes for 131 genes, including 85 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. The results of the phylogenetic analysis of the complete cp genome sequence illustrated that Q. phillyraeoides is a member of the section Quercus and it is most closely related to Q. tarokoensis. Taylor & Francis 2020-01-27 /pmc/articles/PMC7748451/ /pubmed/33366805 http://dx.doi.org/10.1080/23802359.2020.1718029 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Chunping
Liu, Dawei
Nan, Chenghui
Fang, Yanming
Huang, Fulong
The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title_full The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title_fullStr The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title_full_unstemmed The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title_short The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
title_sort complete chloroplast genome sequence of quercus phillyraeoides (fagaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748451/
https://www.ncbi.nlm.nih.gov/pubmed/33366805
http://dx.doi.org/10.1080/23802359.2020.1718029
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