Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome

In this study, we sequenced and characterized the complete mitochondrial genome of Green-winged macaw (Ara chloropterus) listed on CITES Appendix II. The circular double-stranded genome was 16,991 bp in size and included 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), two ribosomal RNA...

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Autores principales: Liu, Da-wei, Pan, Yang, He, Jian, Zhou, Jing, Xie, Chun-ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748460/
https://www.ncbi.nlm.nih.gov/pubmed/33366687
http://dx.doi.org/10.1080/23802359.2019.1711229
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author Liu, Da-wei
Pan, Yang
He, Jian
Zhou, Jing
Xie, Chun-ping
author_facet Liu, Da-wei
Pan, Yang
He, Jian
Zhou, Jing
Xie, Chun-ping
author_sort Liu, Da-wei
collection PubMed
description In this study, we sequenced and characterized the complete mitochondrial genome of Green-winged macaw (Ara chloropterus) listed on CITES Appendix II. The circular double-stranded genome was 16,991 bp in size and included 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), two ribosomal RNA genes (rrnL and rrnS), and one non-coding control region (D-loop). Both order and arrangement of genes were identical to those of other animal mitogenomes. The base content was 30.00% A, 14.38% G, 23.27% T, and 32.35% C, with an A + T content of 53.37%. Furthermore, phylogenetic analysis indicated that A. chloropterus is closely related to the Blue and yellow macaw (A. ararauna).
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spelling pubmed-77484602020-12-22 Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome Liu, Da-wei Pan, Yang He, Jian Zhou, Jing Xie, Chun-ping Mitochondrial DNA B Resour Mitogenome Announcement In this study, we sequenced and characterized the complete mitochondrial genome of Green-winged macaw (Ara chloropterus) listed on CITES Appendix II. The circular double-stranded genome was 16,991 bp in size and included 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), two ribosomal RNA genes (rrnL and rrnS), and one non-coding control region (D-loop). Both order and arrangement of genes were identical to those of other animal mitogenomes. The base content was 30.00% A, 14.38% G, 23.27% T, and 32.35% C, with an A + T content of 53.37%. Furthermore, phylogenetic analysis indicated that A. chloropterus is closely related to the Blue and yellow macaw (A. ararauna). Taylor & Francis 2020-01-16 /pmc/articles/PMC7748460/ /pubmed/33366687 http://dx.doi.org/10.1080/23802359.2019.1711229 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Da-wei
Pan, Yang
He, Jian
Zhou, Jing
Xie, Chun-ping
Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title_full Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title_fullStr Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title_full_unstemmed Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title_short Characterization and phylogenetic analysis of the complete Green-winged macaw (Ara chloropterus) mitogenome
title_sort characterization and phylogenetic analysis of the complete green-winged macaw (ara chloropterus) mitogenome
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748460/
https://www.ncbi.nlm.nih.gov/pubmed/33366687
http://dx.doi.org/10.1080/23802359.2019.1711229
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