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Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny

The plastid genome (plastome) of the endemic Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae) was sequenced and investigated in this study. The complete plastome is 152,713 bp in length with the typical quadripartite structure, which consists of a large single-copy region (LSC...

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Autores principales: Zhang, Mingying, Li, Yimin, Gao, Jing, Chen, Ying, Yan, Yonggang, Zhang, Yuqu, Luo, Yang, Zhang, Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748467/
https://www.ncbi.nlm.nih.gov/pubmed/33366778
http://dx.doi.org/10.1080/23802359.2020.1716641
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author Zhang, Mingying
Li, Yimin
Gao, Jing
Chen, Ying
Yan, Yonggang
Zhang, Yuqu
Luo, Yang
Zhang, Gang
author_facet Zhang, Mingying
Li, Yimin
Gao, Jing
Chen, Ying
Yan, Yonggang
Zhang, Yuqu
Luo, Yang
Zhang, Gang
author_sort Zhang, Mingying
collection PubMed
description The plastid genome (plastome) of the endemic Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae) was sequenced and investigated in this study. The complete plastome is 152,713 bp in length with the typical quadripartite structure, which consists of a large single-copy region (LSC, 84,419 bp), a small single-copy region (SSC, 16,982 bp), and a pair of inverted repeat regions (IRs, 25,656 bp). The overall GC content is 33.2%, and the IR regions are more GC rich (43.2%) than the LSC (36.7%) and SSC (32.8%) regions. A total of 114 unique genes, including 79 protein-coding genes, 31 tRNAs, and four rRNAs were identified. Phylogenetic reconstruction based on complete plastome sequences demonstrated that P. obovata subsp. Willmottiae is phylogenetically closest to P. obovata.
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spelling pubmed-77484672020-12-22 Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny Zhang, Mingying Li, Yimin Gao, Jing Chen, Ying Yan, Yonggang Zhang, Yuqu Luo, Yang Zhang, Gang Mitochondrial DNA B Resour Mitogenome Announcement The plastid genome (plastome) of the endemic Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae) was sequenced and investigated in this study. The complete plastome is 152,713 bp in length with the typical quadripartite structure, which consists of a large single-copy region (LSC, 84,419 bp), a small single-copy region (SSC, 16,982 bp), and a pair of inverted repeat regions (IRs, 25,656 bp). The overall GC content is 33.2%, and the IR regions are more GC rich (43.2%) than the LSC (36.7%) and SSC (32.8%) regions. A total of 114 unique genes, including 79 protein-coding genes, 31 tRNAs, and four rRNAs were identified. Phylogenetic reconstruction based on complete plastome sequences demonstrated that P. obovata subsp. Willmottiae is phylogenetically closest to P. obovata. Taylor & Francis 2020-01-24 /pmc/articles/PMC7748467/ /pubmed/33366778 http://dx.doi.org/10.1080/23802359.2020.1716641 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Mingying
Li, Yimin
Gao, Jing
Chen, Ying
Yan, Yonggang
Zhang, Yuqu
Luo, Yang
Zhang, Gang
Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title_full Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title_fullStr Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title_full_unstemmed Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title_short Complete plastid genome of the Chinese medicinal herb Paeonia obovata subsp. Willmottiae (Paeoniaceae): characterization and phylogeny
title_sort complete plastid genome of the chinese medicinal herb paeonia obovata subsp. willmottiae (paeoniaceae): characterization and phylogeny
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748467/
https://www.ncbi.nlm.nih.gov/pubmed/33366778
http://dx.doi.org/10.1080/23802359.2020.1716641
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