The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea

Rhamnus taquetii (family Rhamnaceae) is a shrub , endemic to Korea. Here, the R. taquetii plastid genome was found to be 161,205 bp long and consists of quadripartite structures; a large single-copy region of 89,373 bp, a small single-copy region of 18,936 bp, and a pair of inverted repeat regions o...

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Autores principales: Jin, Dong-Pil, Park, Jong-Won, Park, Jong-Soo, Choi, Byoung-Hee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748469/
https://www.ncbi.nlm.nih.gov/pubmed/33366812
http://dx.doi.org/10.1080/23802359.2020.1719933
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author Jin, Dong-Pil
Park, Jong-Won
Park, Jong-Soo
Choi, Byoung-Hee
author_facet Jin, Dong-Pil
Park, Jong-Won
Park, Jong-Soo
Choi, Byoung-Hee
author_sort Jin, Dong-Pil
collection PubMed
description Rhamnus taquetii (family Rhamnaceae) is a shrub , endemic to Korea. Here, the R. taquetii plastid genome was found to be 161,205 bp long and consists of quadripartite structures; a large single-copy region of 89,373 bp, a small single-copy region of 18,936 bp, and a pair of inverted repeat regions of 26,448 bp each. The GC content of the sequence was found to be 37.1%. The plastid genome was found to harbor 129 genes, including 84 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. On the phylogenetic tree of Rosales (based on 63 protein-coding genes), Rhamnaceaewas found to be monophyletic.
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spelling pubmed-77484692020-12-22 The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea Jin, Dong-Pil Park, Jong-Won Park, Jong-Soo Choi, Byoung-Hee Mitochondrial DNA B Resour Mitogenome Announcement Rhamnus taquetii (family Rhamnaceae) is a shrub , endemic to Korea. Here, the R. taquetii plastid genome was found to be 161,205 bp long and consists of quadripartite structures; a large single-copy region of 89,373 bp, a small single-copy region of 18,936 bp, and a pair of inverted repeat regions of 26,448 bp each. The GC content of the sequence was found to be 37.1%. The plastid genome was found to harbor 129 genes, including 84 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. On the phylogenetic tree of Rosales (based on 63 protein-coding genes), Rhamnaceaewas found to be monophyletic. Taylor & Francis 2020-01-29 /pmc/articles/PMC7748469/ /pubmed/33366812 http://dx.doi.org/10.1080/23802359.2020.1719933 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jin, Dong-Pil
Park, Jong-Won
Park, Jong-Soo
Choi, Byoung-Hee
The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title_full The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title_fullStr The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title_full_unstemmed The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title_short The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea
title_sort complete plastid genome of rhamnus taquetii, an endemic shrub on the jeju island of korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748469/
https://www.ncbi.nlm.nih.gov/pubmed/33366812
http://dx.doi.org/10.1080/23802359.2020.1719933
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