The complete chloroplast genome of Soroseris umbrella (Asteraceae)

Soroseris umbrella is an alpine medical plant that is distributed in the alpine screes of China, Bhutan, and India. Here, we identified the complete chloroplast genome of S. umbrella. The complete genome size is 152,462 bp, which consists of a large single-copy (LSC) region of 84,125 bp, a small sin...

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Autores principales: Lv, Zhen-Yu, Zhang, Jian-Wen, Chen, Jun-Tong, Li, Zhi-Min, Sun, Hang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748481/
https://www.ncbi.nlm.nih.gov/pubmed/33366681
http://dx.doi.org/10.1080/23802359.2019.1711223
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author Lv, Zhen-Yu
Zhang, Jian-Wen
Chen, Jun-Tong
Li, Zhi-Min
Sun, Hang
author_facet Lv, Zhen-Yu
Zhang, Jian-Wen
Chen, Jun-Tong
Li, Zhi-Min
Sun, Hang
author_sort Lv, Zhen-Yu
collection PubMed
description Soroseris umbrella is an alpine medical plant that is distributed in the alpine screes of China, Bhutan, and India. Here, we identified the complete chloroplast genome of S. umbrella. The complete genome size is 152,462 bp, which consists of a large single-copy (LSC) region of 84,125 bp, a small single-copy (SSC) region of 18,561 bp, a pair of inverted repeat (IR) regions of 24,888 bp each. The overall GC content of genome is 37.7%. A total of 114 unique genes were identified, including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis based on whole chloroplast genome result shows that S. umbrella is most closely related to Taraxacum.
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spelling pubmed-77484812020-12-22 The complete chloroplast genome of Soroseris umbrella (Asteraceae) Lv, Zhen-Yu Zhang, Jian-Wen Chen, Jun-Tong Li, Zhi-Min Sun, Hang Mitochondrial DNA B Resour Mitogenome Announcement Soroseris umbrella is an alpine medical plant that is distributed in the alpine screes of China, Bhutan, and India. Here, we identified the complete chloroplast genome of S. umbrella. The complete genome size is 152,462 bp, which consists of a large single-copy (LSC) region of 84,125 bp, a small single-copy (SSC) region of 18,561 bp, a pair of inverted repeat (IR) regions of 24,888 bp each. The overall GC content of genome is 37.7%. A total of 114 unique genes were identified, including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis based on whole chloroplast genome result shows that S. umbrella is most closely related to Taraxacum. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748481/ /pubmed/33366681 http://dx.doi.org/10.1080/23802359.2019.1711223 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lv, Zhen-Yu
Zhang, Jian-Wen
Chen, Jun-Tong
Li, Zhi-Min
Sun, Hang
The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title_full The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title_fullStr The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title_full_unstemmed The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title_short The complete chloroplast genome of Soroseris umbrella (Asteraceae)
title_sort complete chloroplast genome of soroseris umbrella (asteraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748481/
https://www.ncbi.nlm.nih.gov/pubmed/33366681
http://dx.doi.org/10.1080/23802359.2019.1711223
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