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The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748504/ https://www.ncbi.nlm.nih.gov/pubmed/33366723 http://dx.doi.org/10.1080/23802359.2020.1715278 |
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author | Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu |
author_facet | Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu |
author_sort | Mao, Chang-Li |
collection | PubMed |
description | Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by a large single-copy (LSC) region (86,883 bp) and a small single-copy (SSC) region (20,686 bp). The chloroplast genome has 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. elegans was aligned together with two species of Myristicaceae and five basal angiosperms species for which the complete chloroplast sequence have been reported. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. elegans. |
format | Online Article Text |
id | pubmed-7748504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77485042020-12-22 The complete chloroplast genome sequence of Knema elegans (Myristicaceae) Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by a large single-copy (LSC) region (86,883 bp) and a small single-copy (SSC) region (20,686 bp). The chloroplast genome has 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. elegans was aligned together with two species of Myristicaceae and five basal angiosperms species for which the complete chloroplast sequence have been reported. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. elegans. Taylor & Francis 2020-01-20 /pmc/articles/PMC7748504/ /pubmed/33366723 http://dx.doi.org/10.1080/23802359.2020.1715278 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title | The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title_full | The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title_fullStr | The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title_short | The complete chloroplast genome sequence of Knema elegans (Myristicaceae) |
title_sort | complete chloroplast genome sequence of knema elegans (myristicaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748504/ https://www.ncbi.nlm.nih.gov/pubmed/33366723 http://dx.doi.org/10.1080/23802359.2020.1715278 |
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