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The complete chloroplast genome sequence of Knema elegans (Myristicaceae)

Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by...

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Autores principales: Mao, Chang-Li, Li, Xiao-Qin, Zhang, Feng-Liang, Yang, Tian, Zhao, Qi, Wu, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748504/
https://www.ncbi.nlm.nih.gov/pubmed/33366723
http://dx.doi.org/10.1080/23802359.2020.1715278
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author Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Yang, Tian
Zhao, Qi
Wu, Yu
author_facet Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Yang, Tian
Zhao, Qi
Wu, Yu
author_sort Mao, Chang-Li
collection PubMed
description Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by a large single-copy (LSC) region (86,883 bp) and a small single-copy (SSC) region (20,686 bp). The chloroplast genome has 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. elegans was aligned together with two species of Myristicaceae and five basal angiosperms species for which the complete chloroplast sequence have been reported. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. elegans.
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spelling pubmed-77485042020-12-22 The complete chloroplast genome sequence of Knema elegans (Myristicaceae) Mao, Chang-Li Li, Xiao-Qin Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Knema elegans is a member of Myristicaceae. The K. elegans chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by a large single-copy (LSC) region (86,883 bp) and a small single-copy (SSC) region (20,686 bp). The chloroplast genome has 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of K. elegans was aligned together with two species of Myristicaceae and five basal angiosperms species for which the complete chloroplast sequence have been reported. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of K. elegans. Taylor & Francis 2020-01-20 /pmc/articles/PMC7748504/ /pubmed/33366723 http://dx.doi.org/10.1080/23802359.2020.1715278 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Mao, Chang-Li
Li, Xiao-Qin
Zhang, Feng-Liang
Yang, Tian
Zhao, Qi
Wu, Yu
The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title_full The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title_fullStr The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title_short The complete chloroplast genome sequence of Knema elegans (Myristicaceae)
title_sort complete chloroplast genome sequence of knema elegans (myristicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748504/
https://www.ncbi.nlm.nih.gov/pubmed/33366723
http://dx.doi.org/10.1080/23802359.2020.1715278
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