Characterization and phylogenetic analysis of the complete plastome of Alopecurus japonicus (Gramineae), an annual weed

Alopecurus japonicus is a weed in summer crop field, which is harmful to wheat crops. The complete plastome of A. japonicus was reported in this study. The genome was 136,408 bp in length, consisting of an 80,512 bp large single-copy region, a 12,836 bp small single-copy region, and two 21,530 bp in...

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Detalles Bibliográficos
Autores principales: Guo, Xiu-Xiu, Dai, Chen, Wang, Rong, Qu, Xiao-Jian, Zhang, Xue-Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748505/
https://www.ncbi.nlm.nih.gov/pubmed/33366573
http://dx.doi.org/10.1080/23802359.2019.1704189
Descripción
Sumario:Alopecurus japonicus is a weed in summer crop field, which is harmful to wheat crops. The complete plastome of A. japonicus was reported in this study. The genome was 136,408 bp in length, consisting of an 80,512 bp large single-copy region, a 12,836 bp small single-copy region, and two 21,530 bp inverted repeat regions. The GC content of this plastome was 38.3%. A total of 112 genes were annotated for the plastome of A. japonicus, containing 78 protein-coding genes (PCGs), 30 tRNAs, and 4 rRNAs. Phylogenetic analysis showed that A. japonicus was sister to Alopecurus aequalis.

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