Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)

Allium przewalskianum (Amaryllidaceae) is an important vegetable and/or condiment for Tibetans, Indians, and Nepalese in the highlands of the Himalayas. Here, we reported the complete chloroplast genome of A. przewalskianum using the next-generation sequencing method. The size of the chloroplast gen...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Hongxia, Dong, Bao, Li, Wenqi, Wang, Jiuli, Chen, Wenjie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748517/
https://www.ncbi.nlm.nih.gov/pubmed/33366479
http://dx.doi.org/10.1080/23802359.2019.1698983
_version_ 1783625129938386944
author Wang, Hongxia
Dong, Bao
Li, Wenqi
Wang, Jiuli
Chen, Wenjie
author_facet Wang, Hongxia
Dong, Bao
Li, Wenqi
Wang, Jiuli
Chen, Wenjie
author_sort Wang, Hongxia
collection PubMed
description Allium przewalskianum (Amaryllidaceae) is an important vegetable and/or condiment for Tibetans, Indians, and Nepalese in the highlands of the Himalayas. Here, we reported the complete chloroplast genome of A. przewalskianum using the next-generation sequencing method. The size of the chloroplast genome is 153,509 bp in length, including a large single copy region (LSC) of 82,302 bp, a small single copy region (SSC) of 17,717 bp, and a pair of inverted repeat (IR) regions with 26,745 bp. The A. przewalskianum chloroplast genome encodes 114 genes, including 68 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic tree analysis suggested that A. przewalskianum was closely related to A.ampeloprasum and A.sativum.
format Online
Article
Text
id pubmed-7748517
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77485172020-12-22 Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae) Wang, Hongxia Dong, Bao Li, Wenqi Wang, Jiuli Chen, Wenjie Mitochondrial DNA B Resour Mitogenome Announcement Allium przewalskianum (Amaryllidaceae) is an important vegetable and/or condiment for Tibetans, Indians, and Nepalese in the highlands of the Himalayas. Here, we reported the complete chloroplast genome of A. przewalskianum using the next-generation sequencing method. The size of the chloroplast genome is 153,509 bp in length, including a large single copy region (LSC) of 82,302 bp, a small single copy region (SSC) of 17,717 bp, and a pair of inverted repeat (IR) regions with 26,745 bp. The A. przewalskianum chloroplast genome encodes 114 genes, including 68 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic tree analysis suggested that A. przewalskianum was closely related to A.ampeloprasum and A.sativum. Taylor & Francis 2019-12-12 /pmc/articles/PMC7748517/ /pubmed/33366479 http://dx.doi.org/10.1080/23802359.2019.1698983 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Hongxia
Dong, Bao
Li, Wenqi
Wang, Jiuli
Chen, Wenjie
Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title_full Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title_fullStr Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title_short Characterization of the complete chloroplast genome of Allium przewalskianum (Amaryllidaceae)
title_sort characterization of the complete chloroplast genome of allium przewalskianum (amaryllidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748517/
https://www.ncbi.nlm.nih.gov/pubmed/33366479
http://dx.doi.org/10.1080/23802359.2019.1698983
work_keys_str_mv AT wanghongxia characterizationofthecompletechloroplastgenomeofalliumprzewalskianumamaryllidaceae
AT dongbao characterizationofthecompletechloroplastgenomeofalliumprzewalskianumamaryllidaceae
AT liwenqi characterizationofthecompletechloroplastgenomeofalliumprzewalskianumamaryllidaceae
AT wangjiuli characterizationofthecompletechloroplastgenomeofalliumprzewalskianumamaryllidaceae
AT chenwenjie characterizationofthecompletechloroplastgenomeofalliumprzewalskianumamaryllidaceae

Ejemplares similares