The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant

Lonicera maackii, is scattered in west and northeast China as well as adjacent Korea, Japan and the Soviet union. Here, we assembled and characterized the complete chloroplast (cp) genome of L. maackii using Illumina sequencing data for the first time. The complete cp genome was 155,337 bp in length...

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Detalles Bibliográficos
Autores principales: Jia, Guolun, Wang, Huan, Yu, Pei, Li, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748521/
https://www.ncbi.nlm.nih.gov/pubmed/33366646
http://dx.doi.org/10.1080/23802359.2019.1710288
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author Jia, Guolun
Wang, Huan
Yu, Pei
Li, Peng
author_facet Jia, Guolun
Wang, Huan
Yu, Pei
Li, Peng
author_sort Jia, Guolun
collection PubMed
description Lonicera maackii, is scattered in west and northeast China as well as adjacent Korea, Japan and the Soviet union. Here, we assembled and characterized the complete chloroplast (cp) genome of L. maackii using Illumina sequencing data for the first time. The complete cp genome was 155,337 bp in length, consisting of a pair of inverted repeats of 23,718 bp, a large single-copy region of 89,221 bp and a small single-copy region of 18,680 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and four rRNA genes. Phylogenetic analysis based on 25 complete cp genome sequences indicated that L. maackii is closely related to Lonicera sachalinensis and Lonicera insularis.
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spelling pubmed-77485212020-12-22 The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant Jia, Guolun Wang, Huan Yu, Pei Li, Peng Mitochondrial DNA B Resour Mitogenome Announcement Lonicera maackii, is scattered in west and northeast China as well as adjacent Korea, Japan and the Soviet union. Here, we assembled and characterized the complete chloroplast (cp) genome of L. maackii using Illumina sequencing data for the first time. The complete cp genome was 155,337 bp in length, consisting of a pair of inverted repeats of 23,718 bp, a large single-copy region of 89,221 bp and a small single-copy region of 18,680 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and four rRNA genes. Phylogenetic analysis based on 25 complete cp genome sequences indicated that L. maackii is closely related to Lonicera sachalinensis and Lonicera insularis. Taylor & Francis 2020-01-14 /pmc/articles/PMC7748521/ /pubmed/33366646 http://dx.doi.org/10.1080/23802359.2019.1710288 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jia, Guolun
Wang, Huan
Yu, Pei
Li, Peng
The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title_full The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title_fullStr The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title_full_unstemmed The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title_short The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
title_sort complete chloroplast genome of the lonicera maackii (caprifoliaceae), an ornamental plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748521/
https://www.ncbi.nlm.nih.gov/pubmed/33366646
http://dx.doi.org/10.1080/23802359.2019.1710288
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