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Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae)
Eriobotrya bengalensis (Roxb.) is a subtropical plant under the family Rosaceae with high economic and medicinal value. The whole chloroplast genome of E. bengalensis was sequenced to better understand its phylogenetic position relative to other Rosaceae species. The total length of the E. bengalens...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748530/ https://www.ncbi.nlm.nih.gov/pubmed/33366708 http://dx.doi.org/10.1080/23802359.2020.1714510 |
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author | Xu, Jian Liu, Cheng Xin, Yaxuan Xin, Jing Feng, Li Feng, Fayu Yang, Linyi Sun, Zhenghai |
author_facet | Xu, Jian Liu, Cheng Xin, Yaxuan Xin, Jing Feng, Li Feng, Fayu Yang, Linyi Sun, Zhenghai |
author_sort | Xu, Jian |
collection | PubMed |
description | Eriobotrya bengalensis (Roxb.) is a subtropical plant under the family Rosaceae with high economic and medicinal value. The whole chloroplast genome of E. bengalensis was sequenced to better understand its phylogenetic position relative to other Rosaceae species. The total length of the E. bengalensis chloroplast genome was 159,270 bp, which was composed of a large single-copy (LSC) region of 87,362 bp, a small single-copy (SSC) region of 19,184 bp, and a pair of inverted repeats (IRs) with a length of 26,362 bp separated by LSC and SSC. The total G + C content of the whole chloroplast genome was 36.7%. Phylogenetic analysis of maximum likelihood (TVM + F+R2) was completed using 15 complete chloroplast genomes of Rosaceae species. The results of phylogenetic analysis show that sisterhood exists in E. bengalensis with nine other species of Eriobotrya. |
format | Online Article Text |
id | pubmed-7748530 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77485302020-12-22 Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) Xu, Jian Liu, Cheng Xin, Yaxuan Xin, Jing Feng, Li Feng, Fayu Yang, Linyi Sun, Zhenghai Mitochondrial DNA B Resour Mitogenome Announcement Eriobotrya bengalensis (Roxb.) is a subtropical plant under the family Rosaceae with high economic and medicinal value. The whole chloroplast genome of E. bengalensis was sequenced to better understand its phylogenetic position relative to other Rosaceae species. The total length of the E. bengalensis chloroplast genome was 159,270 bp, which was composed of a large single-copy (LSC) region of 87,362 bp, a small single-copy (SSC) region of 19,184 bp, and a pair of inverted repeats (IRs) with a length of 26,362 bp separated by LSC and SSC. The total G + C content of the whole chloroplast genome was 36.7%. Phylogenetic analysis of maximum likelihood (TVM + F+R2) was completed using 15 complete chloroplast genomes of Rosaceae species. The results of phylogenetic analysis show that sisterhood exists in E. bengalensis with nine other species of Eriobotrya. Taylor & Francis 2020-01-16 /pmc/articles/PMC7748530/ /pubmed/33366708 http://dx.doi.org/10.1080/23802359.2020.1714510 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xu, Jian Liu, Cheng Xin, Yaxuan Xin, Jing Feng, Li Feng, Fayu Yang, Linyi Sun, Zhenghai Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title | Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title_full | Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title_fullStr | Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title_full_unstemmed | Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title_short | Whole chloroplast genome sequence of a subtropical tree Eriobotrya bengalensis (Rosaceae) |
title_sort | whole chloroplast genome sequence of a subtropical tree eriobotrya bengalensis (rosaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748530/ https://www.ncbi.nlm.nih.gov/pubmed/33366708 http://dx.doi.org/10.1080/23802359.2020.1714510 |
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