The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position

In this work, we first reported the complete mitochondrial genome (mitogenome) sequence of Alcippe ruficapilla by next-generation sequencing (NGS). The complete mitogenome of A. ruficapilla was 16,941 bp in length and contained the typical structure of 13 protein-coding genes, 2 ribosomal RNA genes,...

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Autores principales: Chong, Qingqing, Chen, Yanyan, Liao, Juntao, Xiao, Heng, Chen, Shanyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748536/
https://www.ncbi.nlm.nih.gov/pubmed/33366598
http://dx.doi.org/10.1080/23802359.2019.1704646
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author Chong, Qingqing
Chen, Yanyan
Liao, Juntao
Xiao, Heng
Chen, Shanyuan
author_facet Chong, Qingqing
Chen, Yanyan
Liao, Juntao
Xiao, Heng
Chen, Shanyuan
author_sort Chong, Qingqing
collection PubMed
description In this work, we first reported the complete mitochondrial genome (mitogenome) sequence of Alcippe ruficapilla by next-generation sequencing (NGS). The complete mitogenome of A. ruficapilla was 16,941 bp in length and contained the typical structure of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes (tRNAs) and 2 no-coding control regions (D-loop). Nucleotide composition of the whole mitogenome was 29.2% A, 24.2% T, 31.87% C, and 14.8% G, respectively. Phylogenetic analysis indicated that Alcippe ruficapilla gathered into a single branch with Montifrigilla henrici and Acrocephalus scirpaceus with strong support.
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spelling pubmed-77485362020-12-22 The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position Chong, Qingqing Chen, Yanyan Liao, Juntao Xiao, Heng Chen, Shanyuan Mitochondrial DNA B Resour Mitogenome Announcement In this work, we first reported the complete mitochondrial genome (mitogenome) sequence of Alcippe ruficapilla by next-generation sequencing (NGS). The complete mitogenome of A. ruficapilla was 16,941 bp in length and contained the typical structure of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes (tRNAs) and 2 no-coding control regions (D-loop). Nucleotide composition of the whole mitogenome was 29.2% A, 24.2% T, 31.87% C, and 14.8% G, respectively. Phylogenetic analysis indicated that Alcippe ruficapilla gathered into a single branch with Montifrigilla henrici and Acrocephalus scirpaceus with strong support. Taylor & Francis 2020-01-09 /pmc/articles/PMC7748536/ /pubmed/33366598 http://dx.doi.org/10.1080/23802359.2019.1704646 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chong, Qingqing
Chen, Yanyan
Liao, Juntao
Xiao, Heng
Chen, Shanyuan
The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title_full The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title_fullStr The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title_full_unstemmed The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title_short The complete mitochondrial genome sequence of Alcippe ruficapilla (Passeriformes: Timaliidae) and phylogenetic position
title_sort complete mitochondrial genome sequence of alcippe ruficapilla (passeriformes: timaliidae) and phylogenetic position
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748536/
https://www.ncbi.nlm.nih.gov/pubmed/33366598
http://dx.doi.org/10.1080/23802359.2019.1704646
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